RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C FOL3Q12676 427 aaPredicted RBP2.86□□□□□ -1.95
LCB4YOR171C EFG1Q3E705 233 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C YOR338WQ99326 363 aa2.86□□□□□ -1.95
LCB4YOR171C YOR1P53049 1477 aa2.86□□□□□ -1.95
LCB4YOR171C ILV1P00927 576 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C GLN3P18494 730 aa2.86□□□□□ -1.95
LCB4YOR171C RNA14P25298 677 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C MGT1P26188 188 aa2.86□□□□□ -1.95
LCB4YOR171C OCH1P31755 480 aa2.86□□□□□ -1.95
LCB4YOR171C ACB1P31787 87 aa2.86□□□□□ -1.95
LCB4YOR171C UGX2P32772 223 aa2.86□□□□□ -1.95
LCB4YOR171C ECM15P35195 104 aa2.86□□□□□ -1.95
LCB4YOR171C SPC34P36131 295 aa2.86□□□□□ -1.95
LCB4YOR171C RBG1P39729 369 aa2.86□□□□□ -1.95
LCB4YOR171C SHO1P40073 367 aa2.86□□□□□ -1.95
LCB4YOR171C GAT1P43574 510 aa2.86□□□□□ -1.95
LCB4YOR171C ERG26P53199 349 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C CPD1P53314 239 aa2.86□□□□□ -1.95
LCB4YOR171C SAE3P89114 91 aa2.86□□□□□ -1.95
LCB4YOR171C UBC7Q02159 165 aa2.86□□□□□ -1.95
LCB4YOR171C YPL077CQ02831 240 aa2.86□□□□□ -1.95
LCB4YOR171C YDR476CQ03362 224 aa2.86□□□□□ -1.95
LCB4YOR171C PKR1Q03880 122 aaKnown RBP2.86□□□□□ -1.95
LCB4YOR171C ECI1Q05871 280 aa2.86□□□□□ -1.95
LCB4YOR171C FAR10Q06001 478 aa2.86□□□□□ -1.95
LCB4YOR171C SSK1Q07084 712 aa2.86□□□□□ -1.95
LCB4YOR171C YDL057WQ07379 328 aa2.86□□□□□ -1.95
LCB4YOR171C IZH4Q99393 312 aa2.86□□□□□ -1.95
LCB4YOR171C TSC11P40061 1430 aa2.85□□□□□ -1.95
LCB4YOR171C REP1P03871 373 aa2.85□□□□□ -1.95
LCB4YOR171C PEP4P07267 405 aaKnown RBP2.85□□□□□ -1.95
LCB4YOR171C GRX2P17695 143 aaKnown RBP2.85□□□□□ -1.95
LCB4YOR171C EPT1P22140 391 aa2.85□□□□□ -1.95
LCB4YOR171C RPS1BP23248 255 aaKnown RBP2.85□□□□□ -1.95
LCB4YOR171C SLM5P25345 492 aaKnown RBP2.85□□□□□ -1.95
LCB4YOR171C MUD1P32605 298 aaKnown RBP2.85□□□□□ -1.95
LCB4YOR171C YBR241CP38142 488 aa2.85□□□□□ -1.95
LCB4YOR171C LEU5P38702 357 aa2.85□□□□□ -1.95
LCB4YOR171C ANS1P38832 159 aa2.85□□□□□ -1.95
LCB4YOR171C ISC1P40015 477 aaKnown RBP2.85□□□□□ -1.95
LCB4YOR171C RPS10BP46784 105 aaKnown RBP2.85□□□□□ -1.95
LCB4YOR171C PAC10P48363 199 aa2.85□□□□□ -1.95
LCB4YOR171C TIM8P57744 87 aa2.85□□□□□ -1.95
LCB4YOR171C DID2P69771 204 aa2.85□□□□□ -1.95
LCB4YOR171C MHR1Q06630 226 aa2.85□□□□□ -1.95
LCB4YOR171C CTR3Q06686 241 aa2.85□□□□□ -1.95
LCB4YOR171C HEM25Q07534 307 aa2.85□□□□□ -1.95
LCB4YOR171C RPS10AQ08745 105 aaPredicted RBP2.85□□□□□ -1.95
LCB4YOR171C NCE102Q12207 173 aaRIP-Chip data2.85□□□□□ -1.95not detected
LCB4YOR171C YCT1Q12235 531 aa2.85□□□□□ -1.95
LCB4YOR171C ICT1Q12385 394 aa2.85□□□□□ -1.95
LCB4YOR171C RPL20AP0CX23 172 aaKnown RBP2.84□□□□□ -1.95
LCB4YOR171C RPL20BP0CX24 172 aaPredicted RBP2.84□□□□□ -1.95
LCB4YOR171C ARF2P19146 181 aaKnown RBP2.84□□□□□ -1.95
LCB4YOR171C EXO70P19658 623 aa2.84□□□□□ -1.95
LCB4YOR171C PHO80P20052 293 aa2.84□□□□□ -1.95
LCB4YOR171C YCR023CP25351 611 aa2.84□□□□□ -1.95
LCB4YOR171C POF1P25576 258 aa2.84□□□□□ -1.95
LCB4YOR171C BUB2P26448 306 aaPredicted RBP2.84□□□□□ -1.95
LCB4YOR171C INO2P26798 304 aa2.84□□□□□ -1.95
LCB4YOR171C HOM6P31116 359 aaKnown RBP2.84□□□□□ -1.95
LCB4YOR171C QRI5P32344 111 aa2.84□□□□□ -1.95
LCB4YOR171C ZRT1P32804 376 aa2.84□□□□□ -1.95
LCB4YOR171C SHP1P34223 423 aa2.84□□□□□ -1.95
LCB4YOR171C PHD1P36093 366 aa2.84□□□□□ -1.95
LCB4YOR171C SRL3P36167 246 aa2.84□□□□□ -1.95
LCB4YOR171C FRM2P37261 193 aa2.84□□□□□ -1.95
LCB4YOR171C YBR137WP38276 179 aa2.84□□□□□ -1.95
LCB4YOR171C MTC4P38335 694 aaKnown RBP2.84□□□□□ -1.95
LCB4YOR171C IPI1P38803 334 aaPredicted RBP2.84□□□□□ -1.95
LCB4YOR171C NVJ1P38881 321 aa2.84□□□□□ -1.95
LCB4YOR171C PGD1P40356 397 aa2.84□□□□□ -1.95
LCB4YOR171C GLC8P41818 229 aa2.84□□□□□ -1.95
LCB4YOR171C MTM1P53320 366 aa2.84□□□□□ -1.95
LCB4YOR171C COS1P53822 381 aa2.84□□□□□ -1.95
LCB4YOR171C BOR1P53838 576 aa2.84□□□□□ -1.95
LCB4YOR171C ACT1P60010 375 aaKnown RBP2.84□□□□□ -1.95
LCB4YOR171C SWP1Q02795 286 aa2.84□□□□□ -1.95
LCB4YOR171C HSP31Q04432 237 aa2.84□□□□□ -1.95
LCB4YOR171C YDR278CQ05612 105 aa2.84□□□□□ -1.95
LCB4YOR171C BNA5Q05979 453 aa2.84□□□□□ -1.95
LCB4YOR171C ASA1Q06822 443 aa2.84□□□□□ -1.95
LCB4YOR171C THP1Q08231 455 aa2.84□□□□□ -1.95
LCB4YOR171C TAF10Q12030 206 aa2.84□□□□□ -1.95
LCB4YOR171C YLR112WQ12130 139 aa2.84□□□□□ -1.95
LCB4YOR171C YLR046CQ12253 270 aa2.84□□□□□ -1.95
LCB4YOR171C PST2Q12335 198 aaKnown RBP2.84□□□□□ -1.95
LCB4YOR171C NCA2Q12374 616 aa2.84□□□□□ -1.95
LCB4YOR171C MRX4Q12467 430 aa2.84□□□□□ -1.95
LCB4YOR171C PSF1Q12488 208 aa2.84□□□□□ -1.95
LCB4YOR171C YIR021W-AQ3E739 70 aa2.84□□□□□ -1.95
LCB4YOR171C NUP157P40064 1391 aaKnown RBP2.84□□□□□ -1.96
LCB4YOR171C IMA3P0CW40 589 aa2.84□□□□□ -1.96
LCB4YOR171C IMA4P0CW41 589 aa2.84□□□□□ -1.96
LCB4YOR171C GPA2P10823 449 aa2.84□□□□□ -1.96
LCB4YOR171C ARF1P11076 181 aaKnown RBP2.84□□□□□ -1.96
LCB4YOR171C SEC14P24280 304 aaKnown RBP2.84□□□□□ -1.96
LCB4YOR171C TAH1P25638 111 aaPredicted RBP2.84□□□□□ -1.96
LCB4YOR171C YEF1P32622 495 aa2.84□□□□□ -1.96
LCB4YOR171C DBP8P38719 431 aa2.84□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms