RNA–Protein interactions for RNA: YNL294C

RIM21, Transcript of pH sensor molecule, component of the RIM101 pathway, yeast

Gene RIM21, Length 1,602 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM21	YNL294C	FSF1	Q12029	327 aa	Known RBP	4.1	□□□□□ -1.75
RIM21	YNL294C	ISA2	Q12425	185 aa		4.1	□□□□□ -1.75
RIM21	YNL294C	KCS1	Q12494	1050 aa		4.1	□□□□□ -1.75
RIM21	YNL294C	YNR034W-A	Q3E841	98 aa		4.1	□□□□□ -1.75
RIM21	YNL294C	THP2	O13539	261 aa	Known RBP	4.09	□□□□□ -1.76
RIM21	YNL294C	TPI1	P00942	248 aa	Known RBP	4.09	□□□□□ -1.76
RIM21	YNL294C	YFL068W	P0CX99	160 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	YLL066W-A	P0CY00	160 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	YLL067W-A	P0CY01	160 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	DAL82	P21705	255 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	ATG15	P25641	520 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	URK1	P27515	501 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	HOG1	P32485	435 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	UGX2	P32772	223 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	COX15	P40086	486 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	LCB2	P40970	561 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	BAP3	P41815	604 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	SPG5	P42933	373 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	RMD8	P43620	662 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	YJL132W	P47014	750 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	YJR096W	P47137	282 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	PHO23	P50947	330 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	SBH2	P52871	88 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	ROG1	P53118	685 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	DUS1	P53759	423 aa	Known RBP	4.09	□□□□□ -1.76
RIM21	YNL294C	YML018C	Q03730	393 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	YDR132C	Q03900	495 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	ARA2	Q04212	335 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	MRPL35	Q06678	367 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	ENT4	Q07872	247 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	AIM39	Q08223	395 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	RRG7	Q08774	242 aa	Predicted RBP	4.09	□□□□□ -1.76
RIM21	YNL294C	RKI1	Q12189	258 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	PST1	Q12355	444 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	TRM13	Q12383	476 aa		4.09	□□□□□ -1.76
RIM21	YNL294C	FLO11	P08640	1367 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	ALG7	P07286	448 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	RPS4A	P0CX35	261 aa	Known RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	RPS4B	P0CX36	261 aa	Known RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	ERD1	P16151	362 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YCR102C	P25608	368 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	TAH1	P25638	111 aa	Predicted RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	BUB2	P26448	306 aa	Predicted RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	MSK1	P32048	576 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	ARO4	P32449	370 aa	Known RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	MRPL6	P32904	214 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
RIM21	YNL294C	PHD1	P36093	366 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YBR096W	P38256	230 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	TAE1	P38340	232 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YHL044W	P38727	235 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	MUP3	P38734	546 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	SNU13	P39990	126 aa	Known RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	GET2	P40056	285 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	LSM5	P40089	93 aa	Known RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	YER188W	P40103	239 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YJL218W	P40892	196 aa	Known RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	TOS3	P43637	560 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	TAD2	P47058	250 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	PET130	P47065	347 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	SGF73	P53165	657 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YGR250C	P53316	781 aa	Known RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	YNL260C	P53846	198 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	GPI15	P53961	229 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YNL034W	P53963	612 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YNL018C	P53976	612 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	SPR6	Q01684	191 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YVH1	Q02256	364 aa	Known RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	ELC1	Q03071	99 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YMR130W	Q04223	302 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YMR315W	Q04869	349 aa	Known RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	RSF1	Q05043	376 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	SKG3	Q06315	1026 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	COQ10	Q08058	207 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	MMT2	Q08970	484 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	JLP1	Q12358	412 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	ERP3	Q12403	225 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	FOL3	Q12676	427 aa	Predicted RBP	4.08	□□□□□ -1.76
RIM21	YNL294C	YCR075W-A	Q3E830	75 aa		4.08	□□□□□ -1.76
RIM21	YNL294C	YPR170W-B	P0C5R9	85 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	YOL163W	P0CF20	169 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	EST1	P17214	699 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM21	YNL294C	SAG1	P20840	650 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	SEC22	P22214	214 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	PRE8	P23639	250 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	LSB5	P25369	354 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	ADH7	P25377	361 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	PEX2	P32800	271 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	CLB6	P32943	380 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	TIP20	P33891	701 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	EMC3	P36039	253 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	MRPL11	P36521	249 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM21	YNL294C	DER1	P38307	211 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	PHO89	P38361	574 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	YEL057C	P39983	233 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	MOB1	P40484	314 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	SYS1	P41544	203 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	IME4	P41833	600 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	CAK1	P43568	368 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM21	YNL294C	PTR3	P43606	678 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms