RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W CWP1P28319 239 aa1.09□□□□□ -2.23
SLX4YLR135W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
SLX4YLR135W MED8P38304 223 aa1.09□□□□□ -2.23
SLX4YLR135W AVT6P40074 448 aa1.09□□□□□ -2.23
SLX4YLR135W AGX1P43567 385 aa1.09□□□□□ -2.23
SLX4YLR135W BNA6P43619 295 aa1.09□□□□□ -2.23
SLX4YLR135W PEX31P53203 462 aa1.09□□□□□ -2.23
SLX4YLR135W TIM21P53220 239 aa1.09□□□□□ -2.23
SLX4YLR135W MAL13P53338 473 aa1.09□□□□□ -2.23
SLX4YLR135W PET117Q02771 107 aa1.09□□□□□ -2.23
SLX4YLR135W KRE28Q04431 385 aa1.09□□□□□ -2.23
SLX4YLR135W MRX8Q05473 314 aa1.09□□□□□ -2.23
SLX4YLR135W CTR3Q06686 241 aa1.09□□□□□ -2.23
SLX4YLR135W YPL278CQ08990 100 aa1.09□□□□□ -2.23
SLX4YLR135W BTS1Q12051 335 aa1.09□□□□□ -2.23
SLX4YLR135W SGT2Q12118 346 aaKnown RBP1.09□□□□□ -2.23
SLX4YLR135W YOL107WQ12239 342 aa1.09□□□□□ -2.23
SLX4YLR135W AI5_BETAQ9ZZX0 354 aa1.09□□□□□ -2.23
SLX4YLR135W FLO11P08640 1367 aa1.09□□□□□ -2.24
SLX4YLR135W MRP1P10662 321 aaKnown RBP1.09□□□□□ -2.24
SLX4YLR135W CPT1P17898 393 aa1.09□□□□□ -2.24
SLX4YLR135W IMP1P28627 190 aa1.09□□□□□ -2.24
SLX4YLR135W CAM1P29547 415 aaKnown RBP1.09□□□□□ -2.24
SLX4YLR135W ARO4P32449 370 aaKnown RBP1.09□□□□□ -2.24
SLX4YLR135W KRE6P32486 720 aa1.09□□□□□ -2.24
SLX4YLR135W IME2P32581 645 aa1.09□□□□□ -2.24
SLX4YLR135W CAT2P32796 670 aaKnown RBP1.09□□□□□ -2.24
SLX4YLR135W POP8P38208 133 aa1.09□□□□□ -2.24
SLX4YLR135W YER184CP39961 794 aa1.09□□□□□ -2.24
SLX4YLR135W GCN20P43535 752 aaKnown RBP1.09□□□□□ -2.24
SLX4YLR135W HST4P53688 370 aa1.09□□□□□ -2.24
SLX4YLR135W RNH1Q04740 348 aa1.09□□□□□ -2.24
SLX4YLR135W DXO1Q06349 442 aa1.09□□□□□ -2.24
SLX4YLR135W PAM18Q07914 168 aa1.09□□□□□ -2.24
SLX4YLR135W YPL264CQ08980 353 aa1.09□□□□□ -2.24
SLX4YLR135W TY3A-GQ12173 290 aa1.09□□□□□ -2.24
SLX4YLR135W MSH5Q12175 901 aa1.09□□□□□ -2.24
SLX4YLR135W RUD3Q12234 484 aaKnown RBP1.09□□□□□ -2.24
SLX4YLR135W TY3A-IQ99219 290 aa1.09□□□□□ -2.24
SLX4YLR135W YMR316C-AI2HB70 103 aa1.08□□□□□ -2.24
SLX4YLR135W RPL4AP10664 362 aaKnown RBP1.08□□□□□ -2.24
SLX4YLR135W CDC42P19073 191 aa1.08□□□□□ -2.24
SLX4YLR135W RNA15P25299 296 aaPredicted RBP1.08□□□□□ -2.24
SLX4YLR135W HOM6P31116 359 aaKnown RBP1.08□□□□□ -2.24
SLX4YLR135W YHR045WP38775 560 aa1.08□□□□□ -2.24
SLX4YLR135W BIG1P38813 335 aa1.08□□□□□ -2.24
SLX4YLR135W SMB1P40018 196 aaKnown RBP1.08□□□□□ -2.24
SLX4YLR135W AVT7P40501 490 aa1.08□□□□□ -2.24
SLX4YLR135W RPL10P41805 221 aaKnown RBP1.08□□□□□ -2.24
SLX4YLR135W GLG2P47011 380 aa1.08□□□□□ -2.24
SLX4YLR135W YJR012CP47087 207 aa1.08□□□□□ -2.24
SLX4YLR135W RPL4BP49626 362 aaKnown RBP1.08□□□□□ -2.24
SLX4YLR135W HSH155P49955 971 aaKnown RBP1.08□□□□□ -2.24
SLX4YLR135W CAX4P53223 239 aa1.08□□□□□ -2.24
SLX4YLR135W MRPL50P53724 139 aa1.08□□□□□ -2.24
SLX4YLR135W ZRG17P53735 605 aa1.08□□□□□ -2.24
SLX4YLR135W YDL211CQ12121 372 aa1.08□□□□□ -2.24
SLX4YLR135W YOL163WP0CF20 169 aa1.08□□□□□ -2.24
SLX4YLR135W ZWF1P11412 505 aaKnown RBP1.08□□□□□ -2.24
SLX4YLR135W RPO26P20435 155 aa1.08□□□□□ -2.24
SLX4YLR135W VPS3P23643 1011 aa1.08□□□□□ -2.24
SLX4YLR135W ERG2P32352 222 aa1.08□□□□□ -2.24
SLX4YLR135W HMT1P38074 348 aa1.08□□□□□ -2.24
SLX4YLR135W PHO89P38361 574 aa1.08□□□□□ -2.24
SLX4YLR135W YIL012WP40551 113 aa1.08□□□□□ -2.24
SLX4YLR135W SYS1P41544 203 aa1.08□□□□□ -2.24
SLX4YLR135W COS4P43542 379 aa1.08□□□□□ -2.24
SLX4YLR135W FMP41P53889 259 aaKnown RBP1.08□□□□□ -2.24
SLX4YLR135W AAH1P53909 347 aa1.08□□□□□ -2.24
SLX4YLR135W YNL095CP53932 642 aa1.08□□□□□ -2.24
SLX4YLR135W MRS2Q01926 470 aa1.08□□□□□ -2.24
SLX4YLR135W OSH6Q02201 448 aa1.08□□□□□ -2.24
SLX4YLR135W TVP15Q03860 143 aa1.08□□□□□ -2.24
SLX4YLR135W YDR222WQ04925 415 aa1.08□□□□□ -2.24
SLX4YLR135W YOR029WQ12243 111 aa1.08□□□□□ -2.24
SLX4YLR135W ATG5Q12380 294 aa1.08□□□□□ -2.24
SLX4YLR135W FAB1P34756 2278 aa1.07□□□□□ -2.24
SLX4YLR135W COS2P0CX12 379 aa1.07□□□□□ -2.24
SLX4YLR135W COS3P0CX13 379 aa1.07□□□□□ -2.24
SLX4YLR135W PRE7P23724 241 aaKnown RBP1.07□□□□□ -2.24
SLX4YLR135W RPS5P26783 225 aaKnown RBP1.07□□□□□ -2.24
SLX4YLR135W EHD3P28817 500 aa1.07□□□□□ -2.24
SLX4YLR135W BMH1P29311 267 aaKnown RBP1.07□□□□□ -2.24
SLX4YLR135W QRI5P32344 111 aa1.07□□□□□ -2.24
SLX4YLR135W CSG2P35206 410 aa1.07□□□□□ -2.24
SLX4YLR135W HEK2P38199 381 aaKnown RBP RIP-Chip data1.07□□□□□ -2.24not detected
SLX4YLR135W YER085CP40058 173 aa1.07□□□□□ -2.24
SLX4YLR135W YFR045WP43617 309 aa1.07□□□□□ -2.24
SLX4YLR135W HOC1P47124 396 aa1.07□□□□□ -2.24
SLX4YLR135W NBP1P52919 319 aaPredicted RBP1.07□□□□□ -2.24
SLX4YLR135W SLX9P53251 210 aaPredicted RBP1.07□□□□□ -2.24
SLX4YLR135W RSM27P53305 110 aa1.07□□□□□ -2.24
SLX4YLR135W EBS1Q03466 884 aaKnown RBP1.07□□□□□ -2.24
SLX4YLR135W NNT1Q05874 261 aa1.07□□□□□ -2.24
SLX4YLR135W IES4Q08561 116 aa1.07□□□□□ -2.24
SLX4YLR135W SMT3Q12306 101 aaKnown RBP1.07□□□□□ -2.24
SLX4YLR135W TDH2P00358 332 aaKnown RBP1.07□□□□□ -2.24
SLX4YLR135W YAK1P14680 807 aa1.07□□□□□ -2.24
SLX4YLR135W DPB2P24482 689 aaPredicted RBP1.07□□□□□ -2.24
SLX4YLR135W YCR016WP25617 290 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 239.2 ms