RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CNOT6LQ96LI5 555 aaKnown RBP18.82■□□□□ 0.6
PHGDH-234ENST00000642041 ERGIC2Q96RQ1 377 aa18.82■□□□□ 0.6
PHGDH-234ENST00000642041 SPTLC3Q9NUV7 552 aa18.82■□□□□ 0.6
PHGDH-234ENST00000642041 RGS20O76081 388 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 ZXDAP98168 799 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 TBC1D8BQ0IIM8 1120 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 ADAM9Q13443 819 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 ZCWPW2Q504Y3 356 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 METTL7BQ6UX53 244 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 ABHD15Q6UXT9 468 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 SEPT14Q6ZU15 432 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 ZNF720Q7Z2F6 126 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 SESTD1Q86VW0 696 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 PIGOQ8TEQ8 1089 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 CACTINQ8WUQ7 758 aaKnown RBP18.81■□□□□ 0.6
PHGDH-234ENST00000642041 SCFD1Q8WVM8 642 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 SEPT1Q8WYJ6 367 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 DHX38Q92620 1227 aaKnown RBP18.81■□□□□ 0.6
PHGDH-234ENST00000642041 PKD2L1Q9P0L9 805 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 PLXNA3P51805 1871 aa18.81■□□□□ 0.6
PHGDH-234ENST00000642041 MICAL3Q7RTP6 2002 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 A0A1W2PQJ5 194 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 DDX39AO00148 427 aaKnown RBP18.8■□□□□ 0.6
PHGDH-234ENST00000642041 ATP9AO75110 1047 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 GCNT3O95395 438 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 CKBP12277 381 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 PLS3P13797 630 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 ACTR2P61160 394 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 SMAD4Q13485 552 aaKnown RBP18.8■□□□□ 0.6
PHGDH-234ENST00000642041 CLUL1Q15846 466 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 VWA3BQ502W6 1294 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 ODR4Q5SWX8 454 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 GDF6Q6KF10 455 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-234ENST00000642041 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.8■□□□□ 0.6
PHGDH-234ENST00000642041 SFR1Q86XK3 245 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 IRF2BP1Q8IU81 584 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 TMTC1Q8IUR5 882 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 SLC9A9Q8IVB4 645 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 SPIRE2Q8WWL2 714 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 NTPCRQ9BSD7 190 aaKnown RBP18.8■□□□□ 0.6
PHGDH-234ENST00000642041 KCTD10Q9H3F6 313 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 TMX1Q9H3N1 280 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 VPS13AQ96RL7 3174 aa18.8■□□□□ 0.6
PHGDH-234ENST00000642041 KIAA1217Q5T5P2 1943 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 RFC5P40937 340 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 ENPEPQ07075 957 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 DLX2Q07687 328 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-234ENST00000642041 PPP2R5AQ15172 486 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 CCDC40Q4G0X9 1142 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 XKR9Q5GH70 373 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 ASCL5Q7RTU5 278 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 USP37Q86T82 979 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 CREBRFQ8IUR6 639 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 C12orf56Q8IXR9 622 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 TMEM192Q8IY95 271 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 RUSC1Q9BVN2 902 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 VPS16Q9H269 839 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 AZI2Q9H6S1 392 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 ZNF302Q9NR11 478 aa18.79■□□□□ 0.6
PHGDH-234ENST00000642041 ZNHIT6Q9NWK9 470 aaKnown RBP18.79■□□□□ 0.6
PHGDH-234ENST00000642041 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.79■□□□□ 0.6
PHGDH-234ENST00000642041 LUC7L2Q9Y383 392 aaKnown RBP18.79■□□□□ 0.6
PHGDH-234ENST00000642041 MAFBQ9Y5Q3 323 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-234ENST00000642041 IGKV6D-21A0A0A0MT36 114 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 TRIM49BA6NDI0 452 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 KIAA0391O15091 583 aaKnown RBP18.78■□□□□ 0.6
PHGDH-234ENST00000642041 MAPK13O15264 365 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 AMHP03971 560 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 EPB41P11171 864 aaKnown RBP18.78■□□□□ 0.6
PHGDH-234ENST00000642041 UBA1P22314 1058 aaKnown RBP18.78■□□□□ 0.6
PHGDH-234ENST00000642041 AVPR2P30518 371 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 PMS1P54277 932 aaKnown RBP18.78■□□□□ 0.6
PHGDH-234ENST00000642041 VCPP55072 806 aaKnown RBP18.78■□□□□ 0.6
PHGDH-234ENST00000642041 CHMP4BP1P59074 171 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 TXLNBQ8N3L3 684 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 IFT74Q96LB3 600 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 ACCSQ96QU6 501 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 BAG1Q99933 345 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-234ENST00000642041 NIFKQ9BYG3 293 aaKnown RBP18.78■□□□□ 0.6
PHGDH-234ENST00000642041 GBP3Q9H0R5 595 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 NDST4Q9H3R1 872 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 MLXIPQ9HAP2 919 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 GABBR1Q9UBS5 961 aa18.78■□□□□ 0.6
PHGDH-234ENST00000642041 DMDP11532 3685 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 GVINP1Q7Z2Y8 2422 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 BACH1O14867 736 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 HIP1RO75146 1068 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 CCNE2O96020 404 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 ID4P47928 161 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 NUBP1P53384 320 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 TERF1P54274 439 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 MKRN4PQ13434 485 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-234ENST00000642041 LRRC55Q6ZSA7 311 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 PLPPR4Q7Z2D5 763 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 OR8K1Q8NGG5 319 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 CEP170P1Q96L14 293 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 KCNF1Q9H3M0 494 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 TAB2Q9NYJ8 693 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 FRMD4BQ9Y2L6 1034 aa18.77■□□□□ 0.6
PHGDH-234ENST00000642041 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms