RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CLCN6P51797 869 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 MRPS9P82933 396 aaKnown RBP12.57□□□□□ -0.4
LINC00538-201ENST00000626109 GNPTABQ3T906 1256 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 CDKAL1Q5VV42 579 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 SWSAP1Q6NVH7 229 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 FAM180BQ6P0A1 224 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 OTOP1Q7RTM1 612 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 NLRX1Q86UT6 975 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 MXRA8Q9BRK3 442 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 CARD6Q9BX69 1037 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 CDH19Q9H159 772 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 CDHR5Q9HBB8 845 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.57□□□□□ -0.4
LINC00538-201ENST00000626109 DDX25Q9UHL0 483 aaKnown RBP12.57□□□□□ -0.4
LINC00538-201ENST00000626109 RWDD2AQ9UIY3 292 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 UBIAD1Q9Y5Z9 338 aa12.57□□□□□ -0.4
LINC00538-201ENST00000626109 CYP3A7-CYP3A51PA0A087WV96 503 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 FAM86B1E9PN63 330 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 FAM86B2P0C5J1 330 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 ATF7P17544 494 aaPredicted RBP12.56□□□□□ -0.4
LINC00538-201ENST00000626109 CYP3A7P24462 503 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 GUCY2FP51841 1108 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 LBX1P52954 281 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 NFKB2Q00653 900 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 DSG2Q14126 1118 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 CCL14Q16627 93 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 PRR16Q569H4 304 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 MFSD14CQ5VZR4 134 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 C1orf122Q6ZSJ8 110 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 TOGARAM2Q6ZUX3 1019 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 NIPA1Q7RTP0 329 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 SIX5Q8N196 739 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 ATXN2LQ8WWM7 1075 aaKnown RBP12.56□□□□□ -0.4
LINC00538-201ENST00000626109 CXXC1Q9P0U4 656 aaPredicted RBP12.56□□□□□ -0.4
LINC00538-201ENST00000626109 MRFAP1Q9Y605 127 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 DGKBQ9Y6T7 804 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 MYH7BA7E2Y1 1941 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 CASP8AP2Q9UKL3 1982 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 A0A087X0B3 334 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 LRRC10BA6NIK2 292 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 WNT7AO00755 349 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 EDIL3O43854 480 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 AKR1B10O60218 316 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 STX17P56962 302 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 PPP2R3AQ06190 1150 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 MTMR1Q13613 665 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 TUSC1Q2TAM9 212 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 Q4G0T1 1027 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 RRAGBQ5VZM2 374 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 HIBCHQ6NVY1 386 aaPredicted RBP12.56□□□□□ -0.4
LINC00538-201ENST00000626109 TMTC1Q8IUR5 882 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 CDK5RAP3Q96JB5 506 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 MBOAT7Q96N66 472 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 INPP4AQ96PE3 977 aaPredicted RBP12.56□□□□□ -0.4
LINC00538-201ENST00000626109 MED15Q96RN5 788 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 PLEKHA5Q9HAU0 1116 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 VTA1Q9NP79 307 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 FLRT1Q9NZU1 646 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 GTF2IRD1Q9UHL9 959 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 LRRC37A2A6NM11 1700 aa12.56□□□□□ -0.4
LINC00538-201ENST00000626109 IGLV3-22A0A075B6J6 115 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 FOXN3O00409 490 aaPredicted RBP12.55□□□□□ -0.4
LINC00538-201ENST00000626109 MEIS1O00470 390 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 SLC37A4O43826 429 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 ADCY3O60266 1144 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 ITGB5P18084 799 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 PBX1P40424 430 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 EHHADHQ08426 723 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 PAK1Q13153 545 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 TERF2Q15554 542 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00538-201ENST00000626109 ZNF658Q5TYW1 1059 aaPredicted RBP12.55□□□□□ -0.4
LINC00538-201ENST00000626109 MZT2BQ6NZ67 158 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 SEPT14Q6ZU15 432 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 FBXO16Q8IX29 292 aaPredicted RBP12.55□□□□□ -0.4
LINC00538-201ENST00000626109 CYP2W1Q8TAV3 490 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 MGARPQ8TDB4 240 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 TRIB2Q92519 343 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 RABGGTAQ92696 567 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 RBCK1Q9BYM8 510 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 ABHD16BQ9H3Z7 469 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 LIMA1Q9UHB6 759 aaKnown RBP12.55□□□□□ -0.4
LINC00538-201ENST00000626109 GGT7Q9UJ14 662 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 ZHX1Q9UKY1 873 aaPredicted RBP12.55□□□□□ -0.4
LINC00538-201ENST00000626109 DOCK3Q8IZD9 2030 aa12.55□□□□□ -0.4
LINC00538-201ENST00000626109 SYNDIG1LA6NDD5 238 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 N4BP3O15049 544 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 TEX33O43247 280 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 MFAP3LO75121 409 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 SNAI1O95863 264 aaPredicted RBP12.54□□□□□ -0.4
LINC00538-201ENST00000626109 CCDC172P0C7W6 258 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
LINC00538-201ENST00000626109 CYP2C19P33261 490 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 APBA1Q02410 837 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 PIN1Q13526 163 aaPredicted RBP12.54□□□□□ -0.4
LINC00538-201ENST00000626109 CALCRLQ16602 461 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 PTPN21Q16825 1174 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 TEX35Q5T0J7 233 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 C1orf228Q6PIY5 440 aa12.54□□□□□ -0.4
LINC00538-201ENST00000626109 CYP26C1Q6V0L0 522 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms