RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 SIPA1L1O43166 1804 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 HNRNPCL1O60812 293 aaKnown RBP10.61□□□□□ -0.71
HCG18-242ENST00000602319 GNAT1P11488 350 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 KRT13P13646 458 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 CAV1Q03135 178 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 RBBP8NLQ8NC74 664 aaPredicted RBP10.61□□□□□ -0.71
HCG18-242ENST00000602319 C10orf82Q8WW14 230 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 VTI1AQ96AJ9 217 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 AGPAT1Q99943 283 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 FAM167BQ9BTA0 163 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 UBN1Q9NPG3 1134 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 USH1CQ9Y6N9 552 aa10.61□□□□□ -0.71
HCG18-242ENST00000602319 TCRBV7S2A1N4TA0A589 114 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 LRRD1A4D1F6 860 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 FSCN2O14926 492 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 CHKAP35790 457 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 OCRLQ01968 901 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 SEL1L2Q5TEA6 688 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 CYP4X1Q8N118 509 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 KCNV2Q8TDN2 545 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 DYDC1Q8WWB3 177 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 MAML1Q92585 1016 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 CPSF2Q9P2I0 782 aaKnown RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 APEX2Q9UBZ4 518 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 LRRC37AA6NMS7 1700 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 TBX3O15119 743 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 PYGMP11217 842 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 BRAFP15056 766 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 RPA1P27694 616 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 PTDSS1P48651 473 aaKnown RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 RAD23BP54727 409 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 WDR4P57081 412 aaKnown RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 CTC1Q2NKJ3 1217 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 Q4G0T1 1027 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 DCAF17Q5H9S7 520 aaPredicted RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 ADAT2Q7Z6V5 191 aaKnown RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 DZIP1Q86YF9 867 aaKnown RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 TDRPQ86YL5 185 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 SLFN12Q8IYM2 578 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 FBXO41Q8TF61 875 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 NCSTNQ92542 709 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 INTS2Q9H0H0 1204 aaKnown RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 CYP1A2P05177 515 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 GSTA2P09210 222 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 KLC1Q07866 573 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 PRPF4BQ13523 1007 aaKnown RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 FOXB2Q5VYV0 432 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 C15orf52Q6ZUT6 534 aaKnown RBP10.6□□□□□ -0.71
HCG18-242ENST00000602319 SESTD1Q86VW0 696 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 CATSPER3Q86XQ3 398 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 ZNF398Q8TD17 642 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 TEKT4Q8WW24 435 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 GJA10Q969M2 543 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 TIPINQ9BVW5 301 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 SAR1AQ9NR31 198 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 NINJ2Q9NZG7 142 aa10.6□□□□□ -0.71
HCG18-242ENST00000602319 DCTN3O75935 186 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 COMTP21964 271 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 GCAP28676 217 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 UBE2SQ16763 222 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 ITFG2Q969R8 447 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 SNF8Q96H20 258 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 TBC1D10AQ9BXI6 508 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 TBC1D30Q9Y2I9 924 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 ECEL1O95672 775 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 GAP43P17677 238 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 PSMC2P35998 433 aaKnown RBP10.59□□□□□ -0.71
HCG18-242ENST00000602319 TNNI2P48788 182 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 SF3A3Q12874 501 aaKnown RBP eCLIP10.59□□□□□ -0.71
HCG18-242ENST00000602319 WDR66Q8TBY9 1149 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 MGARPQ8TDB4 240 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 DNAJC9Q8WXX5 260 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 FAM210AQ96ND0 272 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 FIZ1Q96SL8 496 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 UBA5Q9GZZ9 404 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 KIAA1683Q9H0B3 1180 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 DCLRE1BQ9H816 532 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 DDX43Q9NXZ2 648 aaKnown RBP10.59□□□□□ -0.71
HCG18-242ENST00000602319 ATRNL1Q5VV63 1379 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 MYH11P35749 1972 aa10.59□□□□□ -0.71
HCG18-242ENST00000602319 EDF1O60869 148 aaKnown RBP10.58□□□□□ -0.72
HCG18-242ENST00000602319 CHRNB2P17787 502 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 ABCB4P21439 1286 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 GPC5P78333 572 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 RASA2Q15283 850 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 CBWD6Q4V339 395 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 CBWD3Q5JTY5 395 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 CBWD5Q5RIA9 395 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 POTEGQ6S5H5 508 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 RNF207Q6ZRF8 634 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 OTUD6AQ7L8S5 288 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 ATL2Q8NHH9 583 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 UHMK1Q8TAS1 419 aaKnown RBP10.58□□□□□ -0.72
HCG18-242ENST00000602319 KIFAP3Q92845 792 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 LENG9Q96B70 501 aa10.58□□□□□ -0.72
HCG18-242ENST00000602319 DENND2DQ9H6A0 471 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms