RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SMIM23A6NLE4 172 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 ANKRD63C9JTQ0 380 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 ALAS1P13196 640 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 EIF2AK2P19525 551 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 SLC29A2Q14542 456 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 LLGL1Q15334 1064 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 SNRNP35Q16560 246 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 ICE2Q659A1 982 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 DENND2CQ68D51 928 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 KCNV1Q6PIU1 500 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 SUPT20HQ8NEM7 779 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 ZNF564Q8TBZ8 553 aaPredicted RBP21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 PTPN22Q9Y2R2 807 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 ZNFX1Q9P2E3 1918 aaKnown RBP21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 TLDC2A0PJX2 215 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 H0YHG0 523 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 GZMAP12544 262 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 HSPA6P17066 643 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 FAM102BQ5T8I3 360 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 HOOK3Q86VS8 718 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 CNPY4Q8N129 248 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 GMLQ99445 158 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 SEMA4AQ9H3S1 761 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 GGA2Q9UJY4 613 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 PCDHA3Q9Y5H8 950 aa21.75■■□□□ 1.07
SHKBP1-225ENST00000600733 PHF20L1A8MW92 1017 aa21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 SPOPO43791 374 aa21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 HNRNPH1P31943 449 aaKnown RBP21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 PCNX4Q63HM2 1172 aa21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 CHADLQ6NUI6 762 aa21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 NSMFQ6X4W1 530 aa21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 NIPA1Q7RTP0 329 aa21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 PRPF38AQ8NAV1 312 aaKnown RBP21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 UHMK1Q8TAS1 419 aaKnown RBP21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 SHC3Q92529 594 aa21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 WNT8AQ9H1J5 351 aa21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 TOPORSQ9NS56 1045 aaPredicted RBP21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 PSME4Q14997 1843 aa21.74■■□□□ 1.07
SHKBP1-225ENST00000600733 CCDC169A6NNP5 214 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 ATP9AO75110 1047 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 MTA2O94776 668 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 KCNJ1P48048 391 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 NCKAP1LP55160 1127 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 SYTL5Q8TDW5 730 aaPredicted RBP21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 ZNF653Q96CK0 615 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 TAAR1Q96RJ0 339 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 ST6GALNAC4Q9H4F1 302 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 RAVER2Q9HCJ3 691 aaKnown RBP21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 MAPK13O15264 365 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 TBC1D12O60347 775 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 LYPLA2O95372 231 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 CYP11B1P15538 503 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 FGFR4P22455 802 aa21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 MKRN4PQ13434 485 aaPredicted RBP21.73■■□□□ 1.07
SHKBP1-225ENST00000600733 PODXLO00592 558 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 ASNSP08243 561 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 MYCLP12524 364 aaPredicted RBP21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 MFAP3P55082 362 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 XKR9Q5GH70 373 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 SLC13A5Q86YT5 568 aaPredicted RBP21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 CCDC105Q8IYK2 499 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 C3orf20Q8ND61 904 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 HELQQ8TDG4 1101 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 DHX38Q92620 1227 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 SEC16BQ96JE7 1060 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 TBX20Q9UMR3 447 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 CCNE2O96020 404 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 CALCAP01258 141 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 CYP1A2P05177 515 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 RARAP10276 462 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 BYSLQ13895 437 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 SIX1Q15475 284 aaPredicted RBP21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 SPRED3Q2MJR0 410 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 KRT39Q6A163 491 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 TAS1R2Q8TE23 839 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 PARD3BQ8TEW8 1205 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 TATDN2Q93075 761 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 AZI2Q9H6S1 392 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 CNOT10Q9H9A5 744 aaKnown RBP21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 USP20Q9Y2K6 914 aa21.72■■□□□ 1.07
SHKBP1-225ENST00000600733 PMM2O15305 246 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 GGPS1O95749 300 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 CNGA1P29973 690 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 COILP38432 576 aaPredicted RBP21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 IFI35P80217 286 aaPredicted RBP21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 MCF2L2Q86YR7 1114 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 C4orf19Q8IY42 314 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 TMEM161BQ8NDZ6 487 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 CABS1Q96KC9 395 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 FAM84AQ96KN4 292 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 TBC1D22BQ9NU19 505 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 C5orf60A6NFR6 353 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 SOX10P56693 466 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 RPS6P62753 249 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 ACTN3Q08043 901 aaPredicted RBP21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 ERMARDQ5T6L9 678 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 CCDC13Q8IYE1 715 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 PGM2Q96G03 612 aa21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 XPO6Q96QU8 1125 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-225ENST00000600733 IWS1Q96ST2 819 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms