RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 MLH1P40692 756 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 TDGQ13569 410 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 CALCRLQ16602 461 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 AMHR2Q16671 573 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 KIAA0319Q5VV43 1072 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 GAD1Q99259 594 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 EIF2AK1Q9BQI3 630 aaKnown RBP19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 RNF39Q9H2S5 420 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 RXFP1Q9HBX9 757 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 ANKEF1Q9NU02 776 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 PCDHA12Q9UN75 941 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 GIT1Q9Y2X7 761 aa19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 PRG3Q9Y2Y8 225 aaPredicted RBP19.47■□□□□ 0.71
SHKBP1-203ENST00000594298 DENND4AQ7Z401 1863 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 INO80B-WBP1J3KQ70 363 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 TEX28O15482 410 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 NEMFO60524 1076 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 PAPLNO95428 1278 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 ATP2B1P20020 1258 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 ARL2P36404 184 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 OR1G1P47890 313 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 GLUD2P49448 558 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 MBTD1Q05BQ5 628 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 LARP1BQ659C4 914 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 MCTP1Q6DN14 999 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 ELMSAN1Q6PJG2 1045 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 TAS1R1Q7RTX1 841 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 SNX21Q969T3 373 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 MFSD1Q9H3U5 465 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 KCNK12Q9HB15 430 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 MAN1C1Q9NR34 630 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 DUSP12Q9UNI6 340 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 HES2Q9Y543 173 aa19.46■□□□□ 0.71
SHKBP1-203ENST00000594298 K7ELQ4 463 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 C2CD2LO14523 706 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 NR1I2O75469 434 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 GLUD1P00367 558 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 PDCP20941 246 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 SCNN1GP51170 649 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 DSG1Q02413 1049 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 CAPSQ13938 189 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 GPR65Q8IYL9 337 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 HACE1Q8IYU2 909 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 ASAP3Q8TDY4 903 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 HDAC7Q8WUI4 952 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 INTS4Q96HW7 963 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 CPB2Q96IY4 423 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 ZFP42Q96MM3 310 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 WDR6Q9NNW5 1121 aaKnown RBP19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 CHST7Q9NS84 486 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 MIOSQ9NXC5 875 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 IGSF9Q9P2J2 1179 aa19.45■□□□□ 0.7
SHKBP1-203ENST00000594298 ZMYM2Q9UBW7 1377 aa19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 USP34Q70CQ2 3546 aa19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 ARF4P18085 180 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 GLRA2P23416 452 aa19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 MCM7P33993 719 aa19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 NBL1P41271 181 aa19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 RARRES1P49788 294 aa19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 CWF19L1Q69YN2 538 aaKnown RBP19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 GSTCDQ8NEC7 633 aa19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 COLEC11Q9BWP8 271 aa19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 TRIM6Q9C030 488 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 TTC12Q9H892 705 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-203ENST00000594298 CCDC195A0A1B0GUA6 201 aa19.43■□□□□ 0.7
SHKBP1-203ENST00000594298 XRCC6P12956 609 aaKnown RBP eCLIP19.43■□□□□ 0.7
SHKBP1-203ENST00000594298 NPR3P17342 541 aa19.43■□□□□ 0.7
SHKBP1-203ENST00000594298 TTC38Q5R3I4 469 aa19.43■□□□□ 0.7
SHKBP1-203ENST00000594298 HSCBQ8IWL3 235 aa19.43■□□□□ 0.7
SHKBP1-203ENST00000594298 STAMQ92783 540 aa19.43■□□□□ 0.7
SHKBP1-203ENST00000594298 MTMR9Q96QG7 549 aa19.43■□□□□ 0.7
SHKBP1-203ENST00000594298 NXF3Q9H4D5 531 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-203ENST00000594298 A0A1B0GUA9 196 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 F8W810 466 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 N4BP1O75113 896 aaKnown RBP19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 AOC1P19801 751 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 TXKP42681 527 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 ZNF174Q15697 407 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 SLC27A1Q6PCB7 646 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 APOL6Q9BWW8 343 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 PLEKHA4Q9H4M7 779 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 FNIP2Q9P278 1114 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 EPS15L1Q9UBC2 864 aa19.42■□□□□ 0.7
SHKBP1-203ENST00000594298 CACNA1HO95180 2353 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 B4GALT5O43286 388 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 GRIK3Q13003 919 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 RILPL1Q5EBL4 403 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 FUT10Q6P4F1 479 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 FLCNQ8NFG4 579 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 CCDC43Q96MW1 224 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 GPR62Q9BZJ7 368 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 POLR3FQ9H1D9 316 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 ZDHHC7Q9NXF8 308 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 CLUHO75153 1309 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 ARID2Q68CP9 1835 aa19.41■□□□□ 0.7
SHKBP1-203ENST00000594298 OR52Z1P0C646 297 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 AKAP5P24588 427 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 CREMQ03060 361 aa19.4■□□□□ 0.7
SHKBP1-203ENST00000594298 USP41Q3LFD5 358 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms