RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 PTPAQ15257 358 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 DUSP6Q16828 381 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 NT5DC1Q5TFE4 455 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 ATF7IP2Q5U623 682 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 LLGL2Q6P1M3 1020 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 DDX53Q86TM3 631 aaKnown RBP18.31■□□□□ 0.52
SREBF1-219ENST00000580540 KCTD17Q8N5Z5 321 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 AUTS2Q8WXX7 1259 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 RPS6KC1Q96S38 1066 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 TMEM175Q9BSA9 504 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 TIPINQ9BVW5 301 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 ZSCAN16Q9H4T2 348 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-219ENST00000580540 CD207Q9UJ71 328 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 BARX2Q9UMQ3 279 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-219ENST00000580540 FAM50BQ9Y247 325 aa18.31■□□□□ 0.52
SREBF1-219ENST00000580540 NRP1O14786 923 aa18.3■□□□□ 0.52
SREBF1-219ENST00000580540 SLC16A4O15374 487 aa18.3■□□□□ 0.52
SREBF1-219ENST00000580540 SLC26A4O43511 780 aa18.3■□□□□ 0.52
SREBF1-219ENST00000580540 NR1I2O75469 434 aa18.3■□□□□ 0.52
SREBF1-219ENST00000580540 KRT18P05783 430 aaKnown RBP18.3■□□□□ 0.52
SREBF1-219ENST00000580540 PLCG1P19174 1290 aa18.3■□□□□ 0.52
SREBF1-219ENST00000580540 MAPK7Q13164 816 aa18.3■□□□□ 0.52
SREBF1-219ENST00000580540 GPBP1Q86WP2 473 aa18.3■□□□□ 0.52
SREBF1-219ENST00000580540 MRPL43Q8N983 215 aaKnown RBP18.3■□□□□ 0.52
SREBF1-219ENST00000580540 CDCA3Q99618 268 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-219ENST00000580540 GDAQ9Y2T3 454 aa18.3■□□□□ 0.52
SREBF1-219ENST00000580540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-219ENST00000580540 C2orf71A6NGG8 1288 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 GLP2RO95838 553 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 SMTNP53814 917 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 MCM6Q14566 821 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 DCAF4L1Q3SXM0 396 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 APBB1IPQ7Z5R6 666 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-219ENST00000580540 COLGALT2Q8IYK4 626 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 EPSTI1Q96J88 318 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 CLIC6Q96NY7 704 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 USP28Q96RU2 1077 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 TMEM134Q9H6X4 195 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 C17orf75Q9HAS0 396 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 CLEC1BQ9P126 229 aa18.29■□□□□ 0.52
SREBF1-219ENST00000580540 RBM19Q9Y4C8 960 aaKnown RBP18.29■□□□□ 0.52
SREBF1-219ENST00000580540 PHLPP2Q6ZVD8 1323 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 INPPL1O15357 1258 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 MBTPS2O43462 519 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 RECQL4O94761 1208 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 SRGAP2BP0DMP2 458 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 PLS3P13797 630 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 SSTR3P32745 418 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-219ENST00000580540 STRN3Q13033 797 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 ARSHQ5FYA8 562 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 USP49Q70CQ1 688 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 ZBTB33Q86T24 672 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 VN1R2Q8NFZ6 395 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 LRRC15Q8TF66 581 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 RABGGTAQ92696 567 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 RAD54LQ92698 747 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 TCHPQ9BT92 498 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 TARS2Q9BW92 718 aaKnown RBP18.28■□□□□ 0.52
SREBF1-219ENST00000580540 MRPL4Q9BYD3 311 aaKnown RBP18.28■□□□□ 0.52
SREBF1-219ENST00000580540 ZBP1Q9H171 429 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 ZHX3Q9H4I2 956 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 BLOC1S4Q9NUP1 217 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 KCND2Q9NZV8 630 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 ARHGAP28Q9P2N2 729 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 KCNG1Q9UIX4 513 aa18.28■□□□□ 0.52
SREBF1-219ENST00000580540 FBXO2Q9UK22 296 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-219ENST00000580540 SRPRBQ9Y5M8 271 aaKnown RBP18.28■□□□□ 0.52
SREBF1-219ENST00000580540 FSD2A1L4K1 749 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 FAM13AO94988 1023 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 CTSAP10619 480 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 HARSP12081 509 aaKnown RBP18.27■□□□□ 0.52
SREBF1-219ENST00000580540 DSC1Q08554 894 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 GRIK3Q13003 919 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 SMAD4Q13485 552 aaKnown RBP18.27■□□□□ 0.52
SREBF1-219ENST00000580540 STK38Q15208 465 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 FOXD4L6Q3SYB3 417 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-219ENST00000580540 FOXD4L3Q6VB84 417 aaPredicted RBP18.27■□□□□ 0.52
SREBF1-219ENST00000580540 TAS1R3Q7RTX0 852 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 FAM178BQ8IXR5 827 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 GSTCDQ8NEC7 633 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 SPIRE2Q8WWL2 714 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 MSLNLQ96KJ4 702 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 ACO2Q99798 780 aaKnown RBP18.27■□□□□ 0.52
SREBF1-219ENST00000580540 COLEC11Q9BWP8 271 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 APOL5Q9BWW9 433 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 VN1R3Q9BXE9 311 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 CCSER1Q9C0I3 900 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 TFIP11Q9UBB9 837 aaKnown RBP18.27■□□□□ 0.52
SREBF1-219ENST00000580540 CCDC39Q9UFE4 941 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 TNFSF13BQ9Y275 285 aa18.27■□□□□ 0.52
SREBF1-219ENST00000580540 NCOR1O75376 2440 aa18.27■□□□□ 0.51
SREBF1-219ENST00000580540 TDRD15B5MCY1 1934 aaKnown RBP18.26■□□□□ 0.51
SREBF1-219ENST00000580540 C2CD2LO14523 706 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 CLASP2O75122 1294 aaKnown RBP18.26■□□□□ 0.51
SREBF1-219ENST00000580540 TXLNAP40222 546 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 OSTNP61366 133 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 SLC39A14Q15043 492 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 ZNF568Q3ZCX4 644 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 MYCT1Q8N699 235 aa18.26■□□□□ 0.51
SREBF1-219ENST00000580540 ZNF396Q96N95 335 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms