RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 NPTXRO95502 500 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 NR3C1P04150 777 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 ACRP10323 421 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 MYBPC2Q14324 1141 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 DCAF4L1Q3SXM0 396 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 APBB1IPQ7Z5R6 666 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 SLC9A9Q8IVB4 645 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 DUSP9Q99956 384 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 LBHD1Q9BQE6 289 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 BPIFA3Q9BQP9 254 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 ANP32EQ9BTT0 268 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 NAT10Q9H0A0 1025 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 TSPYL2Q9H2G4 693 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 PCIF1Q9H4Z3 704 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 FAM105AQ9NUU6 356 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 DMAC2Q9NW81 257 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 HSPBP1Q9NZL4 362 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 AGO2Q9UKV8 859 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 ANK1P16157 1881 aa17.37■□□□□ 0.37
CSNK1D-212ENST00000580061 ENPP3O14638 875 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 KIAA0391O15091 583 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 OGTO15294 1046 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 FAM189A1O60320 539 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 HARSP12081 509 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 NR2F2P24468 414 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 FKBP3Q00688 224 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 IKBKEQ14164 716 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 C16orf59Q7L2K0 433 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 ZC3H3Q8IXZ2 948 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 CEP120Q8N960 986 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 MSTO1Q9BUK6 570 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 TRIM6Q9C030 488 aaPredicted RBP17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 C1orf112Q9NSG2 853 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 TTC3P53804 2025 aa17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 TNRC18O15417 2968 aaPredicted RBP17.36■□□□□ 0.37
CSNK1D-212ENST00000580061 RALGAPA2Q2PPJ7 1873 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 PTPRSQ13332 1948 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 TRIP11Q15643 1979 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 A0A0U1RQF3 1178 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 ABHD14A-ACY1A0A1B0GW23 586 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 C9IYK1 514 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 ZNF623O75123 536 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 CAPN15O75808 1086 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 LDHAP00338 332 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 RPL13P26373 211 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 ZNF165P49910 485 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 RAB27AP51159 221 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 CYP2J2P51589 502 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 EPHB4P54760 987 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 ADAM9Q13443 819 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 SLC24A5Q71RS6 500 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 GPD1LQ8N335 351 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 XXYLT1Q8NBI6 393 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 SMG8Q8ND04 991 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 ZSWIM2Q8NEG5 633 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 ENOX1Q8TC92 643 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 SAAL1Q96ER3 474 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 TSPY26PQ9H489 355 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 IPPQ9Y573 584 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
CSNK1D-212ENST00000580061 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 CETN3O15182 167 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 EXTL3O43909 919 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 BAIAP3O94812 1187 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 CAVIN2O95810 425 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 SKIP12755 728 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 ACTN1P12814 892 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 GRM5P41594 1212 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 FAM189BP81408 668 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 PDCD11Q14690 1871 aaKnown RBP17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 SEZ6Q53EL9 994 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 ZBTB41Q5SVQ8 909 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 SPATA1Q5VX52 437 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 PSRC1Q6PGN9 363 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 CRELD2Q6UXH1 353 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 LRRC55Q6ZSA7 311 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 ECHDC2Q86YB7 292 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 THNSL1Q8IYQ7 743 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 CSGALNACT2Q8N6G5 542 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 EEF2KMTQ96G04 330 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 FBXL18Q96ME1 805 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 NXF3Q9H4D5 531 aaKnown RBP17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 HES2Q9Y543 173 aa17.34■□□□□ 0.37
CSNK1D-212ENST00000580061 GOLGA8IPA6NC78 632 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 GOLGA8JA6NMD2 632 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 EXOC3O60645 756 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 EFCAB14O75071 495 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 FGBP02675 491 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 STAG3L1P0CL83 205 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 TNFSF9P41273 254 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 CASP4P49662 377 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 ACOT2P49753 483 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 OSTNP61366 133 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 MYL5Q02045 173 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 KYAT1Q16773 422 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 TMEM240Q5SV17 173 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 ZNF365Q70YC5 407 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 OTOP2Q7RTS6 562 aa17.33■□□□□ 0.36
CSNK1D-212ENST00000580061 MRPL10Q7Z7H8 261 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms