RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 KRT17Q04695 432 aa14.64□□□□□ -0.07
NDEL1-204ENST00000578172 ZNF662Q6ZS27 426 aa14.64□□□□□ -0.07
NDEL1-204ENST00000578172 CCDC13Q8IYE1 715 aa14.64□□□□□ -0.07
NDEL1-204ENST00000578172 NCAPGQ9BPX3 1015 aa14.64□□□□□ -0.07
NDEL1-204ENST00000578172 ODF2LQ9ULJ1 636 aa14.64□□□□□ -0.07
NDEL1-204ENST00000578172 CDC25CP30307 473 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 HOXA10P31260 410 aaPredicted RBP14.63□□□□□ -0.07
NDEL1-204ENST00000578172 PIK3CAP42336 1068 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 BAATQ14032 418 aaPredicted RBP14.63□□□□□ -0.07
NDEL1-204ENST00000578172 WDR44Q5JSH3 913 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 CERKQ8TCT0 537 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 SCFD2Q8WU76 684 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 SH3GL2Q99962 352 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 A0A1B0GUA9 196 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 F5H423 210 aaPredicted RBP14.63□□□□□ -0.07
NDEL1-204ENST00000578172 MAP3K6O95382 1288 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 EN1Q05925 392 aaPredicted RBP14.63□□□□□ -0.07
NDEL1-204ENST00000578172 RASA3Q14644 834 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 SPRED3Q2MJR0 410 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 DCUN1D2Q6PH85 259 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 ACTRT1Q8TDG2 376 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 HVCN1Q96D96 273 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 SYNCQ9H7C4 482 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 C1orf112Q9NSG2 853 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 FGFR1OP2Q9NVK5 253 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 BCORQ6W2J9 1755 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 TMEM253P0C7T8 217 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 STX2P32856 288 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 GCKP35557 465 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 HSPA9P38646 679 aaKnown RBP14.63□□□□□ -0.07
NDEL1-204ENST00000578172 NSFP46459 744 aaKnown RBP14.63□□□□□ -0.07
NDEL1-204ENST00000578172 Q4G0T1 1027 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 ATP13A4Q4VNC1 1196 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 INTS8Q75QN2 995 aaKnown RBP14.63□□□□□ -0.07
NDEL1-204ENST00000578172 SAMD7Q7Z3H4 446 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 SEMA4DQ92854 862 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 KLF6Q99612 283 aaPredicted RBP14.63□□□□□ -0.07
NDEL1-204ENST00000578172 CHST7Q9NS84 486 aa14.63□□□□□ -0.07
NDEL1-204ENST00000578172 PSMD10O75832 226 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 CNGA1P29973 690 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 MFAP3P55082 362 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 CCDC197Q8NCU1 140 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 SLC5A5Q92911 643 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 ARHGEF2Q92974 986 aaKnown RBP14.62□□□□□ -0.07
NDEL1-204ENST00000578172 NXF1Q9UBU9 619 aaKnown RBP14.62□□□□□ -0.07
NDEL1-204ENST00000578172 GOLGA8RI6L899 631 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 O00370 1275 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 FAM107AO95990 144 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 P4HBP07237 508 aaKnown RBP14.62□□□□□ -0.07
NDEL1-204ENST00000578172 RRM1P23921 792 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 SEMA3FQ13275 785 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 ATP8B4Q8TF62 1192 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 MXRA8Q9BRK3 442 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 POLR3CQ9BUI4 534 aaPredicted RBP14.62□□□□□ -0.07
NDEL1-204ENST00000578172 VCPKMTQ9H867 229 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 PAPPAQ13219 1627 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 TCP11X1B4DZS4 312 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 CSDE1O75534 798 aaKnown RBP14.62□□□□□ -0.07
NDEL1-204ENST00000578172 SRGAP2CP0DJJ0 459 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 RARAP10276 462 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 SCP2P22307 547 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 RWDD2BP57060 319 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 ZBTB45Q96K62 511 aaPredicted RBP14.62□□□□□ -0.07
NDEL1-204ENST00000578172 PAGR1Q9BTK6 254 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.62□□□□□ -0.07
NDEL1-204ENST00000578172 PASKQ96RG2 1323 aa14.62□□□□□ -0.07
NDEL1-204ENST00000578172 IGLV3-22A0A075B6J6 115 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 YDJCA8MPS7 323 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 MAPK7Q13164 816 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 TTC27Q6P3X3 843 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 KCNV2Q8TDN2 545 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 KIFAP3Q92845 792 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
NDEL1-204ENST00000578172 ATG4CQ96DT6 458 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 ATF2P15336 505 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 RARRES1P49788 294 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 POLGP54098 1239 aaPredicted RBP14.61□□□□□ -0.07
NDEL1-204ENST00000578172 DAW1Q8N136 415 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 PRELID2Q8N945 189 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 XPO6Q96QU8 1125 aaKnown RBP14.61□□□□□ -0.07
NDEL1-204ENST00000578172 CXorf56Q9H5V9 222 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 SLITRK6Q9H5Y7 841 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
NDEL1-204ENST00000578172 MTFR1LQ9H019 292 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 TUFT1Q9NNX1 390 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 ANAPC5Q9UJX4 755 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 PLCH1Q4KWH8 1693 aa14.61□□□□□ -0.07
NDEL1-204ENST00000578172 TBX3O15119 743 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 SLC16A3O15427 465 aaKnown RBP14.6□□□□□ -0.07
NDEL1-204ENST00000578172 IGBP1P78318 339 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 SMTNL2Q2TAL5 461 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 ZNF449Q6P9G9 518 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 ANKMY2Q8IV38 441 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 C4orf33Q8N1A6 199 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 CCDC33Q8N5R6 958 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 CHMP6Q96FZ7 201 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 RSRC1Q96IZ7 334 aaKnown RBP14.6□□□□□ -0.07
NDEL1-204ENST00000578172 ZWILCHQ9H900 591 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 SLC40A1Q9NP59 571 aa14.6□□□□□ -0.07
NDEL1-204ENST00000578172 COL14A1Q05707 1796 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 322 ms