RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 HNRNPH1P31943 449 aaKnown RBP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 CNGA3Q16281 694 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 ZNF699Q32M78 642 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 REXO1L1PQ8IX06 675 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 RNF139Q8WU17 664 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 ZIM3Q96PE6 472 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 RBM15Q96T37 977 aaKnown RBP eCLIP11.37□□□□□ -0.592e-7■■□□□ 13
SEC22B-201ENST00000578049 PAGR1Q9BTK6 254 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 UBN1Q9NPG3 1134 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 LRRIQ3A6PVS8 624 aaPredicted RBP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 HNRNPCP07910 306 aaKnown RBP eCLIP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 HSPA2P54652 639 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 YWHAHQ04917 246 aaPredicted RBP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 THAP11Q96EK4 314 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 APEX2Q9UBZ4 518 aa11.37□□□□□ -0.59
SEC22B-201ENST00000578049 G3BP2Q9UN86 482 aaKnown RBP11.37□□□□□ -0.59
SEC22B-201ENST00000578049 POTEB3A0JP26 581 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 CDH2P19022 906 aaPredicted RBP11.36□□□□□ -0.59
SEC22B-201ENST00000578049 GNA15P30679 374 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 VHLP40337 213 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 POTEBQ6S5H4 581 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 STOX1Q6ZVD7 989 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 NCAPG2Q86XI2 1143 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 JAMLQ86YT9 394 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 MAML3Q96JK9 1138 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 LMTK3Q96Q04 1460 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 H0Y626 953 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 TRIM16O95361 564 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 UCHL3P15374 230 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 GALCP54803 685 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 LRRC14Q15048 493 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 TMCO4Q5TGY1 634 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 LCA5Q86VQ0 697 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 SPICE1Q8N0Z3 855 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 C7orf31Q8N865 590 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 KRT35Q92764 455 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 EML4Q9HC35 981 aaKnown RBP11.36□□□□□ -0.59
SEC22B-201ENST00000578049 RBM12Q9NTZ6 932 aaKnown RBP11.36□□□□□ -0.59
SEC22B-201ENST00000578049 IL1RAPL1Q9NZN1 696 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 ARAP3Q8WWN8 1544 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 LRRC7Q96NW7 1537 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 FAM170AA1A519 330 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 PRAMEF22A3QJZ6 481 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 SUPT20HL1Q3ZLR7 823 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 PPP6R3Q5H9R7 873 aaPredicted RBP11.36□□□□□ -0.59
SEC22B-201ENST00000578049 FAM47CQ5HY64 1035 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 CCDC24Q8N4L8 307 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 SH2D3CQ8N5H7 860 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 SKA2Q8WVK7 121 aaPredicted RBP11.36□□□□□ -0.59
SEC22B-201ENST00000578049 ZNF212Q9UDV6 495 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 SUGT1Q9Y2Z0 365 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 GOLGA8IPA6NC78 632 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 GOLGA8JA6NMD2 632 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 ZBTB24O43167 697 aaPredicted RBP11.36□□□□□ -0.59
SEC22B-201ENST00000578049 KCNA3P22001 575 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 PSMC5P62195 406 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 SBK1Q52WX2 424 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 PPP1R2P1Q96PQ5 205 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 PRMT1Q99873 361 aaKnown RBP11.36□□□□□ -0.59
SEC22B-201ENST00000578049 PLA2G4AP47712 749 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 ARSEP51690 589 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
SEC22B-201ENST00000578049 C16orf89Q6UX73 402 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 TEX2Q8IWB9 1127 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 HSPH1Q92598 858 aa11.36□□□□□ -0.59
SEC22B-201ENST00000578049 FOXN1O15353 648 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 BIRC2Q13490 618 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 ERFEQ4G0M1 354 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 PAPD7Q5XG87 772 aaKnown RBP11.35□□□□□ -0.59
SEC22B-201ENST00000578049 ADA2Q9NZK5 511 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 XPAP23025 273 aaPredicted RBP11.35□□□□□ -0.59
SEC22B-201ENST00000578049 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 ERP27Q96DN0 273 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 DNAJC7Q99615 494 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 GTSE1Q9NYZ3 720 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 SLC13A4Q9UKG4 626 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 FHOD1Q9Y613 1164 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 PSMD3O43242 534 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 PSMC1P62191 440 aaKnown RBP11.35□□□□□ -0.59
SEC22B-201ENST00000578049 UBXN2AP68543 259 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 MTMR1Q13613 665 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 FRMD8P1Q9BZ68 369 aaPredicted RBP11.35□□□□□ -0.59
SEC22B-201ENST00000578049 PABPC3Q9H361 631 aaKnown RBP11.35□□□□□ -0.59
SEC22B-201ENST00000578049 CDC42BPGQ6DT37 1551 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 MYO3BQ8WXR4 1341 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 SRGAP2CP0DJJ0 459 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 ACTR2P61160 394 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 CYB5D1Q6P9G0 228 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 GPD1LQ8N335 351 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 NOA1Q8NC60 698 aaKnown RBP11.35□□□□□ -0.59
SEC22B-201ENST00000578049 ACAP3Q96P50 834 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 NSMCE4AQ9NXX6 385 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 FIS1Q9Y3D6 152 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 ZFATQ9P243 1243 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 H3BRJ5 948 aa11.35□□□□□ -0.59
SEC22B-201ENST00000578049 NPEPPSP55786 919 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms