RNA–Protein interactions for RNA: ENST00000566624.5

RPL4-213, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-213ENST00000566624 NDRG2Q9UN36 371 aaKnown RBP12.02□□□□□ -0.49
RPL4-213ENST00000566624 NOTCH4Q99466 2003 aa12.02□□□□□ -0.49
RPL4-213ENST00000566624 CNTNAP2Q9UHC6 1331 aa12.02□□□□□ -0.49
RPL4-213ENST00000566624 NBEAQ8NFP9 2946 aa12.02□□□□□ -0.49
RPL4-213ENST00000566624 SETXQ7Z333 2677 aaKnown RBP12.02□□□□□ -0.49
RPL4-213ENST00000566624 COL4A2P08572 1712 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 NRG2O14511 850 aaPredicted RBP12.01□□□□□ -0.49
RPL4-213ENST00000566624 CCL16O15467 120 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 CALM1P0DP23 149 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 CALM2P0DP24 149 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 CALM3P0DP25 149 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 NCLP19338 710 aaKnown RBP12.01□□□□□ -0.49
RPL4-213ENST00000566624 HOXC13P31276 330 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 NRLP54845 237 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 GAS6Q14393 721 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 SF3A2Q15428 464 aaKnown RBP12.01□□□□□ -0.49
RPL4-213ENST00000566624 MTERF2Q49AM1 385 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 PRR16Q569H4 304 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 CASC1Q6TDU7 716 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 PRSS55Q6UWB4 352 aaPredicted RBP12.01□□□□□ -0.49
RPL4-213ENST00000566624 MAMSTRQ6ZN01 415 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 ING5Q8WYH8 240 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 DDX1Q92499 740 aaKnown RBP12.01□□□□□ -0.49
RPL4-213ENST00000566624 RABGGTAQ92696 567 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 COL26A1Q96A83 441 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 ZFP42Q96MM3 310 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 GAD1Q99259 594 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 MTA3Q9BTC8 594 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 NIFKQ9BYG3 293 aaKnown RBP12.01□□□□□ -0.49
RPL4-213ENST00000566624 LRRC2Q9BYS8 371 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 BARHL2Q9NY43 387 aa12.01□□□□□ -0.49
RPL4-213ENST00000566624 IGF2RP11717 2491 aa12□□□□□ -0.49
RPL4-213ENST00000566624 ARL5CA6NH57 179 aa12□□□□□ -0.49
RPL4-213ENST00000566624 CHURC1-FNTBB4DL54 471 aa12□□□□□ -0.49
RPL4-213ENST00000566624 ADAM12O43184 909 aa12□□□□□ -0.49
RPL4-213ENST00000566624 HNRNPA1P09651 372 aaKnown RBP eCLIP12□□□□□ -0.49
RPL4-213ENST00000566624 MLH1P40692 756 aa12□□□□□ -0.49
RPL4-213ENST00000566624 LIFRP42702 1097 aa12□□□□□ -0.49
RPL4-213ENST00000566624 FNTBP49356 437 aa12□□□□□ -0.49
RPL4-213ENST00000566624 SCNN1GP51170 649 aa12□□□□□ -0.49
RPL4-213ENST00000566624 CDC42EP1Q00587 391 aa12□□□□□ -0.49
RPL4-213ENST00000566624 SETQ01105 290 aaPredicted RBP12□□□□□ -0.49
RPL4-213ENST00000566624 SATB1Q01826 763 aa12□□□□□ -0.49
RPL4-213ENST00000566624 NUCB1Q02818 461 aa12□□□□□ -0.49
RPL4-213ENST00000566624 SIM2Q14190 667 aaPredicted RBP12□□□□□ -0.49
RPL4-213ENST00000566624 RTP2Q5QGT7 225 aa12□□□□□ -0.49
RPL4-213ENST00000566624 IL31Q6EBC2 164 aa12□□□□□ -0.49
RPL4-213ENST00000566624 FUT10Q6P4F1 479 aa12□□□□□ -0.49
RPL4-213ENST00000566624 MICU3Q86XE3 530 aa12□□□□□ -0.49
RPL4-213ENST00000566624 GJA10Q969M2 543 aa12□□□□□ -0.49
RPL4-213ENST00000566624 CLSTN3Q9BQT9 956 aa12□□□□□ -0.49
RPL4-213ENST00000566624 INO80BQ9C086 356 aaPredicted RBP12□□□□□ -0.49
RPL4-213ENST00000566624 UNC45AQ9H3U1 944 aa12□□□□□ -0.49
RPL4-213ENST00000566624 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12□□□□□ -0.49
RPL4-213ENST00000566624 CACNG4Q9UBN1 327 aa12□□□□□ -0.49
RPL4-213ENST00000566624 SEPT9Q9UHD8 586 aaPredicted RBP12□□□□□ -0.49
RPL4-213ENST00000566624 TCEAL9Q9UHQ7 104 aa12□□□□□ -0.49
RPL4-213ENST00000566624 HES2Q9Y543 173 aa12□□□□□ -0.49
RPL4-213ENST00000566624 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
RPL4-213ENST00000566624 LAMA1P25391 3075 aa12□□□□□ -0.49
RPL4-213ENST00000566624 AKAP13Q12802 2813 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 CHMP2AO43633 222 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 ECI2O75521 394 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 C8AP07357 584 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 GSPT1P15170 499 aaKnown RBP11.99□□□□□ -0.49
RPL4-213ENST00000566624 LIMK1P53667 647 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 CCDC6Q16204 474 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 USP41Q3LFD5 358 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 TANGO2Q6ICL3 276 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 UNQ6494/PRO21346Q6UXR6 183 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.99□□□□□ -0.49
RPL4-213ENST00000566624 GPR65Q8IYL9 337 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 TMTC2Q8N394 836 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 FAM160A2Q8N612 972 aaPredicted RBP11.99□□□□□ -0.49
RPL4-213ENST00000566624 KDF1Q8NAX2 398 aaPredicted RBP11.99□□□□□ -0.49
RPL4-213ENST00000566624 GSTCDQ8NEC7 633 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 TMEM87BQ96K49 555 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 TMEM121BQ9BXQ6 578 aaPredicted RBP11.99□□□□□ -0.49
RPL4-213ENST00000566624 EIF2AQ9BY44 585 aaKnown RBP11.99□□□□□ -0.49
RPL4-213ENST00000566624 DNMT3BQ9UBC3 853 aaKnown RBP11.99□□□□□ -0.49
RPL4-213ENST00000566624 POLIQ9UNA4 740 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 MRPS17Q9Y2R5 130 aaKnown RBP11.99□□□□□ -0.49
RPL4-213ENST00000566624 IPPQ9Y573 584 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 SLC12A7Q9Y666 1083 aa11.99□□□□□ -0.49
RPL4-213ENST00000566624 K7ESF4 209 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 MSH4O15457 936 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 MAFO75444 373 aaPredicted RBP11.98□□□□□ -0.49
RPL4-213ENST00000566624 IGHDP01880 384 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 ITGA4P13612 1032 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 FCARP24071 287 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 CHMLP26374 656 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 HOXA9P31269 272 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 CIITAP33076 1130 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 MCM5P33992 734 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 DNM2P50570 870 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 SLC5A9Q2M3M2 681 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 XKR3Q5GH77 459 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 PPM1LQ5SGD2 360 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 EXOC6Q8TAG9 804 aa11.98□□□□□ -0.49
RPL4-213ENST00000566624 MCRS1Q96EZ8 462 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms