RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 CPLX4Q7Z7G2 160 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 PALB2Q86YC2 1186 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 ELMO3Q96BJ8 720 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 DMAC2Q9NW81 257 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 TELO2Q9Y4R8 837 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 CCNE2O96020 404 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 BCRP11274 1271 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 SOX5P35711 763 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 RPS6KA1Q15418 735 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 EMSYQ7Z589 1322 aa20.22■□□□□ 0.83
PDE8A-211ENST00000559742 GTPBP10A4D1E9 387 aaKnown RBP20.21■□□□□ 0.83
PDE8A-211ENST00000559742 RAD51CO43502 376 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 ANP32DO95626 131 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 DRD4P21917 467 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 RIPK1Q13546 671 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 BAATQ14032 418 aaPredicted RBP20.21■□□□□ 0.83
PDE8A-211ENST00000559742 ODF2Q5BJF6 829 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 XKR9Q5GH70 373 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 RUFY4Q6ZNE9 571 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 TAF4BQ92750 862 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 SAAL1Q96ER3 474 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 GPR88Q9GZN0 384 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 CNOT7Q9UIV1 285 aaKnown RBP20.21■□□□□ 0.83
PDE8A-211ENST00000559742 H2AFZP0C0S5 128 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 MUTP22033 750 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 GALCP54803 685 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 PRKG1Q13976 671 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 H2AFVQ71UI9 128 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 DAAM2Q86T65 1068 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.21■□□□□ 0.834e-8■■■■■ 36.3
PDE8A-211ENST00000559742 PDCD2LQ9BRP1 358 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 MKNK1Q9BUB5 465 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 AP1M1Q9BXS5 423 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 TAS2R14Q9NYV8 317 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 APEX2Q9UBZ4 518 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 DOCK5Q9H7D0 1870 aa20.21■□□□□ 0.83
PDE8A-211ENST00000559742 CCT8L1PA6NM43 557 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 CEP104O60308 925 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 CTNND1O60716 968 aaKnown RBP20.2■□□□□ 0.82
PDE8A-211ENST00000559742 FERP16591 822 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 ECHS1P30084 290 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 CTNNA1P35221 906 aaKnown RBP20.2■□□□□ 0.82
PDE8A-211ENST00000559742 HMGCS2P54868 508 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 PPP3CAQ08209 521 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 HLTFQ14527 1009 aaKnown RBP eCLIP20.2■□□□□ 0.82
PDE8A-211ENST00000559742 HAUS6Q7Z4H7 955 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 TCP11Q8WWU5 503 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 INPP4AQ96PE3 977 aaPredicted RBP20.2■□□□□ 0.82
PDE8A-211ENST00000559742 STRA6Q9BX79 667 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 STK33Q9BYT3 514 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 PXMP2Q9NR77 195 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 FBXL5Q9UKA1 691 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 CCDC169A6NNP5 214 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 FOXN3O00409 490 aaPredicted RBP20.2■□□□□ 0.82
PDE8A-211ENST00000559742 VWA5AO00534 786 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 AGBL2Q5U5Z8 902 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 CCDC63Q8NA47 563 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 TPCN2Q8NHX9 752 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 CCHCR1Q8TD31 782 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 MICAL1Q8TDZ2 1067 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 WRNIP1Q96S55 665 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 ISCUQ9H1K1 167 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 RNF146Q9NTX7 359 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 L3MBTL1Q9Y468 752 aa20.2■□□□□ 0.82
PDE8A-211ENST00000559742 ZBED4O75132 1171 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 KIF4AO95239 1232 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 KRT13P13646 458 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 CAPRIN2Q6IMN6 1127 aaKnown RBP20.19■□□□□ 0.82
PDE8A-211ENST00000559742 NEK9Q8TD19 979 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 UBE2TQ9NPD8 197 aaPredicted RBP20.19■□□□□ 0.82
PDE8A-211ENST00000559742 ETAA1Q9NY74 926 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 CHORDC1Q9UHD1 332 aaPredicted RBP20.19■□□□□ 0.82
PDE8A-211ENST00000559742 NOVA2Q9UNW9 492 aaKnown RBP20.19■□□□□ 0.82
PDE8A-211ENST00000559742 SLC12A4Q9UP95 1085 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 UBE4BO95155 1302 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 IGSF9BQ9UPX0 1349 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 IRF6O14896 467 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 SMNDC1O75940 238 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDE8A-211ENST00000559742 PLS3P13797 630 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 PEX26Q7Z412 305 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 LRRC57Q8N9N7 239 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 PARD3BQ8TEW8 1205 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 ACP6Q9NPH0 428 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 LOXHD1Q8IVV2 1947 aa20.19■□□□□ 0.82
PDE8A-211ENST00000559742 CLTAP09496 248 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 ERVK-9P63128 1117 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 NFIL3Q16649 462 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 C10orf76Q5T2E6 689 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 SNRNP48Q6IEG0 339 aaKnown RBP20.18■□□□□ 0.82
PDE8A-211ENST00000559742 MIS18BP1Q6P0N0 1132 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 ARHGEF19Q8IW93 802 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 EIF1ADQ8N9N8 165 aaKnown RBP20.18■□□□□ 0.82
PDE8A-211ENST00000559742 PLEKHO2Q8TD55 490 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 SLC20A1Q8WUM9 679 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 KAT5Q92993 513 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 CCDC127Q96BQ5 260 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 LRRC45Q96CN5 670 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 ZNF570Q96NI8 536 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 VPS33BQ9H267 617 aa20.18■□□□□ 0.82
PDE8A-211ENST00000559742 HOMER3Q9NSC5 361 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms