RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 LRRIQ3A6PVS8 624 aaPredicted RBP14.95□□□□□ -0.02
TPM1-215ENST00000558868 AKR1B10O60218 316 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 KIF5CO60282 957 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 ZEB2O60315 1214 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 DUSP11O75319 330 aaKnown RBP14.95□□□□□ -0.02
TPM1-215ENST00000558868 HOXD10P28358 340 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 EIF4A3P38919 411 aaKnown RBP14.95□□□□□ -0.02
TPM1-215ENST00000558868 GCLMP48507 274 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 CLCN3P51790 818 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 DLG4P78352 724 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 PPP3CAQ08209 521 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 KLHL30Q0D2K2 578 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 PRPF4BQ13523 1007 aaKnown RBP14.95□□□□□ -0.02
TPM1-215ENST00000558868 SURF1Q15526 300 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 FAM187BQ17R55 369 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 EPC2Q52LR7 807 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 TDRD12Q587J7 1177 aaKnown RBP14.95□□□□□ -0.02
TPM1-215ENST00000558868 KIAA1328Q86T90 577 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 ZNF410Q86VK4 478 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 ACRBPQ8NEB7 543 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 CCDC127Q96BQ5 260 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 FAM81BQ96LP2 452 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 FNBP1Q96RU3 617 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 ACO2Q99798 780 aaKnown RBP14.95□□□□□ -0.02
TPM1-215ENST00000558868 TCHPQ9BT92 498 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 TSGA10Q9BZW7 698 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 HAUS4Q9H6D7 363 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 ARHGAP20Q9P2F6 1191 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 MYO1AQ9UBC5 1043 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 R3HCC1Q9Y3T6 440 aaKnown RBP14.95□□□□□ -0.02
TPM1-215ENST00000558868 FHOD1Q9Y613 1164 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 DOCK3Q8IZD9 2030 aa14.95□□□□□ -0.02
TPM1-215ENST00000558868 INO80B-WBP1J3KQ70 363 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 ADCY6O43306 1168 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 AOC2O75106 756 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 LCA5LO95447 670 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 PSEN2P49810 448 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 KIF11P52732 1056 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 AP3M2P53677 418 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 JAM2P57087 298 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 CLDN10P78369 228 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 SP3Q02447 781 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 MCL1Q07820 350 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 MFSD10Q14728 455 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 TMEM132AQ24JP5 1023 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 C1orf220Q5T0J3 134 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 IQCEQ6IPM2 695 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 TSHZ1Q6ZSZ6 1077 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 VPS36Q86VN1 386 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 ZNF710Q8N1W2 664 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 ZSWIM2Q8NEG5 633 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 PLEKHO2Q8TD55 490 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 ZNF592Q92610 1267 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 INO80BQ9C086 356 aaPredicted RBP14.94□□□□□ -0.02
TPM1-215ENST00000558868 TMEM117Q9H0C3 514 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 SPC25Q9HBM1 224 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 WBP1LQ9NX94 342 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 RBAKQ9NYW8 714 aaPredicted RBP14.94□□□□□ -0.02
TPM1-215ENST00000558868 ANKFY1Q9P2R3 1169 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 DNAJC12Q9UKB3 198 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 COQ4Q9Y3A0 265 aa14.94□□□□□ -0.02
TPM1-215ENST00000558868 OGTO15294 1046 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 KRT86O43790 486 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 ZC3H11AO75152 810 aaKnown RBP eCLIP14.93□□□□□ -0.02
TPM1-215ENST00000558868 GFPT2O94808 682 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 MYL3P08590 195 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 SMIM10L2AP0DMW4 78 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 SMIM10L2BP0DMW5 78 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 GNAT1P11488 350 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 CTGFP29279 349 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 MAP2K2P36507 400 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 PRKCIP41743 596 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 FLT3LGP49771 235 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 MBTD1Q05BQ5 628 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 FSCN1Q16658 493 aaKnown RBP14.93□□□□□ -0.02
TPM1-215ENST00000558868 KYAT1Q16773 422 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 KIAA0753Q2KHM9 967 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 C10orf76Q5T2E6 689 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 ATF7IP2Q5U623 682 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 HGSNATQ68CP4 663 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 MPZL3Q6UWV2 235 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 SRGAP1Q7Z6B7 1085 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 FBXL13Q8NEE6 735 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 LMO3Q8TAP4 145 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 TNFSF13BQ9Y275 285 aa14.93□□□□□ -0.02
TPM1-215ENST00000558868 SMIM35A0A1B0GVV1 85 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 HAS3O00219 553 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 DLATP10515 647 aaKnown RBP14.92□□□□□ -0.02
TPM1-215ENST00000558868 CYBAP13498 195 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 TNNI1P19237 187 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 SOX5P35711 763 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 GPC3P51654 580 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 VAV2P52735 878 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 NLRP11P59045 1033 aaKnown RBP14.92□□□□□ -0.02
TPM1-215ENST00000558868 GNG11P61952 73 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 POU5F1Q01860 360 aaKnown RBP14.92□□□□□ -0.02
TPM1-215ENST00000558868 APBA1Q02410 837 aa14.92□□□□□ -0.02
TPM1-215ENST00000558868 MAP2K1Q02750 393 aaPredicted RBP14.92□□□□□ -0.02
TPM1-215ENST00000558868 PCBP1Q15365 356 aaKnown RBP eCLIP14.92□□□□□ -0.02
TPM1-215ENST00000558868 NFRKBQ6P4R8 1299 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms