RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CTSSP25774 331 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 SLC5A3P53794 718 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 PPP3CAQ08209 521 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 ODF1Q14990 250 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 ELAVL1Q15717 326 aaKnown RBP4.12□□□□□ -1.75
SCFD1-213ENST00000554776 CLUL1Q15846 466 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 USP39Q53GS9 565 aaKnown RBP4.12□□□□□ -1.75
SCFD1-213ENST00000554776 HSP90AB2PQ58FF8 381 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 C19orf54Q5BKX5 351 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 MFSD5Q6N075 450 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 BTNL9Q6UXG8 535 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 CHPFQ8IZ52 775 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 THEMISQ8N1K5 641 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-213ENST00000554776 LILRA3Q8N6C8 439 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-213ENST00000554776 SNX33Q8WV41 574 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 JADE3Q92613 823 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 HOXB13Q92826 284 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-213ENST00000554776 EXTL1Q92935 676 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 ARL8AQ96BM9 186 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 CHMP4CQ96CF2 233 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 PAWRQ96IZ0 340 aaKnown RBP4.12□□□□□ -1.75
SCFD1-213ENST00000554776 ZNF512Q96ME7 567 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-213ENST00000554776 ACE2Q9BYF1 805 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-213ENST00000554776 DMRT3Q9NQL9 472 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 AURKAIP1Q9NWT8 199 aaPredicted RBP4.12□□□□□ -1.75
SCFD1-213ENST00000554776 ZNF180Q9UJW8 692 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 GIT1Q9Y2X7 761 aa4.12□□□□□ -1.75
SCFD1-213ENST00000554776 XPOTO43592 962 aaKnown RBP4.11□□□□□ -1.75
SCFD1-213ENST00000554776 PRAMEF4O60810 478 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 STC2O76061 302 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 GYPEP15421 78 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 ZSCAN20P17040 1043 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-213ENST00000554776 CASRP41180 1078 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 MCAMP43121 646 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 MALLQ13021 153 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 PIN1Q13526 163 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-213ENST00000554776 MST1LQ2TV78 715 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 MIIPQ5JXC2 388 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 CRIP3Q6Q6R5 217 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 HTR3DQ70Z44 454 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 PNMA8AQ86V59 439 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-213ENST00000554776 MDGA1Q8NFP4 955 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 IL17DQ8TAD2 202 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 JPH3Q8WXH2 748 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-213ENST00000554776 FATE1Q969F0 183 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 ZNF503Q96F45 646 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 SLC2A13Q96QE2 648 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 ZNF747Q9BV97 191 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 GREM2Q9H772 168 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 ZNF703Q9H7S9 590 aaPredicted RBP4.11□□□□□ -1.75
SCFD1-213ENST00000554776 MKS1Q9NXB0 559 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 TUBD1Q9UJT1 453 aa4.11□□□□□ -1.75
SCFD1-213ENST00000554776 HOXA3O43365 443 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-213ENST00000554776 MFAP3LO75121 409 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 IPO13O94829 963 aaKnown RBP4.1□□□□□ -1.75
SCFD1-213ENST00000554776 SNUPNO95149 360 aaKnown RBP4.1□□□□□ -1.75
SCFD1-213ENST00000554776 C5AR1P21730 350 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 GZMKP49863 264 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 SCNN1GP51170 649 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 RABGGTBP53611 331 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 DUSP2Q05923 314 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 MRPL49Q13405 166 aaKnown RBP4.1□□□□□ -1.75
SCFD1-213ENST00000554776 FOXE3Q13461 319 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 RRP1BQ14684 758 aaKnown RBP4.1□□□□□ -1.75
SCFD1-213ENST00000554776 ACAP2Q15057 778 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 NRN1LQ496H8 165 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 MUM1L1Q5H9M0 696 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 C1QL3Q5VWW1 255 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 Q6ZRM9 215 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 APBB1IPQ7Z5R6 666 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-213ENST00000554776 TMPRSS6Q8IU80 811 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 C1orf210Q8IVY1 113 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 TPH2Q8IWU9 490 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 ELOA2Q8IYF1 753 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-213ENST00000554776 MYO1HQ8N1T3 1032 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 GPR156Q8NFN8 814 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 OR5M3Q8NGP4 307 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 ZNF480Q8WV37 535 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 RIN2Q8WYP3 895 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-213ENST00000554776 IL17RAQ96F46 866 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 TEKT5Q96M29 485 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 PDCD2LQ9BRP1 358 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 RHOBTB2Q9BYZ6 727 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 CDH19Q9H159 772 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 VPS11Q9H270 941 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 SLC52A1Q9NWF4 448 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 TRPS1Q9UHF7 1281 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 SPEF1Q9Y4P9 236 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 RPTORQ8N122 1335 aa4.1□□□□□ -1.75
SCFD1-213ENST00000554776 KLRG2A4D1S0 409 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-213ENST00000554776 KLHL33A6NCF5 533 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 NDUFS2O75306 463 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 ITGA10O75578 1167 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 ABLIM3O94929 683 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 ZRANB2O95218 330 aaKnown RBP eCLIP4.09□□□□□ -1.75
SCFD1-213ENST00000554776 MAP4K4O95819 1239 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-213ENST00000554776 AMHP03971 560 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 CT47B1P0C2W7 299 aaPredicted RBP4.09□□□□□ -1.75
SCFD1-213ENST00000554776 ATF3P18847 181 aa4.09□□□□□ -1.75
SCFD1-213ENST00000554776 GNAT2P19087 354 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms