RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PPME1Q9Y570 386 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 FAM186AA6NE01 2351 aa12.85□□□□□ -0.35
PRPF40B-212ENST00000551111 MYH11P35749 1972 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 PI15O43692 258 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 GAS2O43903 313 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 USO1O60763 962 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 MED24O75448 989 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 NPTXRO95502 500 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 RPL17P18621 184 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 ANAPC15P60006 121 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 MXD4Q14582 209 aaPredicted RBP12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 NOTUMQ6P988 496 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 GLYCTKQ8IVS8 523 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 EXOC8Q8IYI6 725 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 UBALD2Q8IYN6 164 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 RSAD2Q8WXG1 361 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 RSPH1Q8WYR4 309 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 BSNDQ8WZ55 320 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 NAP1L4Q99733 375 aaKnown RBP12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 HERC2P3Q9BVR0 1158 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 SFXN1Q9H9B4 322 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 ANKEF1Q9NU02 776 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 USTQ9Y2C2 406 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 CACNA1IQ9P0X4 2223 aa12.84□□□□□ -0.35
PRPF40B-212ENST00000551111 COL4A3Q01955 1670 aa12.83□□□□□ -0.35
PRPF40B-212ENST00000551111 CITO14578 2027 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 CCDC195A0A1B0GUA6 201 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 NARSO43776 548 aaKnown RBP12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 NEMFO60524 1076 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 DGAT1O75907 488 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 NPR3P17342 541 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 AXLP30530 894 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 MCM7P33993 719 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 NEK4P51957 841 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 PPFIBP1Q86W92 1011 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 CATSPER3Q86XQ3 398 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 PALB2Q86YC2 1186 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 WASF1Q92558 559 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 ATOH1Q92858 354 aaPredicted RBP12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 EMILIN2Q9BXX0 1053 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 KCNK12Q9HB15 430 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 RXFP1Q9HBX9 757 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 CHST7Q9NS84 486 aa12.83□□□□□ -0.36
PRPF40B-212ENST00000551111 A0A1B0GUA9 196 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 URODP06132 367 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 GLUD2P49448 558 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 DSG1Q02413 1049 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 POU5F1BQ06416 359 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 TFDP1Q14186 410 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 ANKRD1Q15327 319 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 ECM1Q16610 540 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 CWF19L1Q69YN2 538 aaKnown RBP12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 PRSS55Q6UWB4 352 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 CNNM3Q8NE01 707 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 ZNF707Q96C28 371 aaPredicted RBP12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 MYADMQ96S97 322 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 GIT1Q9Y2X7 761 aa12.82□□□□□ -0.36
PRPF40B-212ENST00000551111 LRRIQ4A6NIV6 560 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 PTGESO14684 152 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 ZNF174Q15697 407 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 EEF1DP3Q658K8 133 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 FUT10Q6P4F1 479 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 SLC27A1Q6PCB7 646 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 LILRA6Q6PI73 481 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 CCDC149Q6ZUS6 474 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 HASPINQ8TF76 798 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 CCDC51Q96ER9 411 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 PRRX2Q99811 253 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 NFKBIZQ9BYH8 718 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 TRIM6Q9C030 488 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 BRMS1Q9HCU9 246 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 UBN1Q9NPG3 1134 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 PARP2Q9UGN5 583 aa12.81□□□□□ -0.36
PRPF40B-212ENST00000551111 PDCD11Q14690 1871 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 FANCMQ8IYD8 2048 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 CARNS1A5YM72 827 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 ADAM12O43184 909 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 TGM5O43548 720 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 GFRA3O60609 400 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 GLUD1P00367 558 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 ADH1AP07327 375 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 TDGQ13569 410 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 NBR1Q14596 966 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 NAB2Q15742 525 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 RTP2Q5QGT7 225 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 C15orf39Q6ZRI6 1047 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 OTOP3Q7RTS5 596 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 ASCL5Q7RTU5 278 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 NOSTRINQ8IVI9 506 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 FLCNQ8NFG4 579 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 CMASQ8NFW8 434 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 RIN2Q8WYP3 895 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 ACSF2Q96CM8 615 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 KIFC3Q9BVG8 833 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 COLEC11Q9BWP8 271 aa12.8□□□□□ -0.36
PRPF40B-212ENST00000551111 FZD8Q9H461 694 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms