RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 PCSK9Q8NBP7 692 aaKnown RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 SPC24Q8NBT2 197 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 GOLGA5Q8TBA6 731 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 ANP32BQ92688 251 aaKnown RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 WNT8BQ93098 351 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 ZBTB45Q96K62 511 aaPredicted RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 MAP7D2Q96T17 732 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 TARS2Q9BW92 718 aaKnown RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 NFKBIZQ9BYH8 718 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 FAM49AQ9H0Q0 323 aaPredicted RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 C2orf40Q9H1Z8 148 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 ADAMTS10Q9H324 1103 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 PCIF1Q9H4Z3 704 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 PAK6Q9NQU5 681 aaPredicted RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 HSPBP1Q9NZL4 362 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 CGNQ9P2M7 1197 aaKnown RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 MAGEC2Q9UBF1 373 aaPredicted RBP8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 KCNG1Q9UIX4 513 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 EXOC7Q9UPT5 735 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 STYXL1Q9Y6J8 313 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 CENPFP49454 3210 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 RALGAPA2Q2PPJ7 1873 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 CITO14578 2027 aa8.85□□□□□ -0.99
DEPDC4-207ENST00000549249 GOLGA8IPA6NC78 632 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 GOLGA8JA6NMD2 632 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 HNRNPDLO14979 420 aaKnown RBP8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 B4GALT5O43286 388 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 GPR32O75388 356 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 CSDE1O75534 798 aaKnown RBP8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 GNA14O95837 355 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 ADRB2P07550 413 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 CFHP08603 1231 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 PRKCSHP14314 528 aaPredicted RBP8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 GARTP22102 1010 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 SCP2P22307 547 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 RPL13P26373 211 aaKnown RBP8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 ABCD1P33897 745 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 PHKA2P46019 1235 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 LIG4P49917 911 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 EFNA5P52803 228 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 NLRP11P59045 1033 aaKnown RBP8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 TMEM62Q0P6H9 643 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 STRN3Q13033 797 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 MYBPC2Q14324 1141 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 PDCD11Q14690 1871 aaKnown RBP8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 FAM187BQ17R55 369 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 CCDC40Q4G0X9 1142 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 FRMD5Q7Z6J6 570 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 ZNF410Q86VK4 478 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 CREBRFQ8IUR6 639 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 VSTM4Q8IW00 320 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 ZBTB8OSQ8IWT0 167 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 FAM186BQ8IYM0 893 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 C7orf31Q8N865 590 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 PLEKHO2Q8TD55 490 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 DNAJB3Q8WWF6 145 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 SAAL1Q96ER3 474 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 BICD1Q96G01 975 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 ACO2Q99798 780 aaKnown RBP8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 TSEN34Q9BSV6 310 aaKnown RBP8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 MKNK1Q9BUB5 465 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 NOC4LQ9BVI4 516 aaKnown RBP8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 FZD8Q9H461 694 aa8.84□□□□□ -0.99
DEPDC4-207ENST00000549249 A0A1W2PQ45 241 aaPredicted RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 A0A1W2PQY0 241 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 MOXD2PA6NHM9 499 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 INO80B-WBP1J3KQ70 363 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 ACKR2O00590 384 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 NRG2O14511 850 aaPredicted RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 LCE2BO14633 110 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 N4BP3O15049 544 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 FAM189A1O60320 539 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 MYCP01106 439 aaPredicted RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 EPB41P11171 864 aaKnown RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 GNAT1P11488 350 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 CCL5P13501 91 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 EN2P19622 333 aaPredicted RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 FGFR4P22455 802 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 PROZP22891 400 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 PSMC2P35998 433 aaKnown RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 ITGA7Q13683 1181 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 MAPK6Q16659 721 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 KIZQ2M2Z5 673 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 VWA3BQ502W6 1294 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 FAM47CQ5HY64 1035 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 ZBTB41Q5SVQ8 909 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 C1orf220Q5T0J3 134 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 EEF1DP3Q658K8 133 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 ZPBP2Q6X784 338 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 TMC6Q7Z403 805 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 CBWD2Q8IUF1 395 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 SLC43A3Q8NBI5 491 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 XXYLT1Q8NBI6 393 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 ANKRD20A12PQ8NF67 263 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 TMEM40Q8WWA1 233 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 POMGNT1Q8WZA1 660 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 DHX38Q92620 1227 aaKnown RBP8.83□□□□□ -1
DEPDC4-207ENST00000549249 ZNF333Q96JL9 665 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 FBXL18Q96ME1 805 aa8.83□□□□□ -1
DEPDC4-207ENST00000549249 OSMRQ99650 979 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms