RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TTC7AQ9ULT0 858 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 LTBP4Q8N2S1 1624 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 MAST2Q6P0Q8 1798 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 CCDC188H7C350 402 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 PIAS1O75925 651 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 ICAM1P05362 532 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 ATF7P17544 494 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 CALCOCO2Q13137 446 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 SUPT20HQ8NEM7 779 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 GDAP1Q8TB36 358 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 BSNDQ8WZ55 320 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 RNF25Q96BH1 459 aaPredicted RBP14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 KREMEN1Q96MU8 473 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 SH3GL2Q99962 352 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 AGO4Q9HCK5 861 aaKnown RBP14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 PIK3CDO00329 1044 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 VCAM1P19320 739 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 PPATQ06203 517 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 SF3B2Q13435 895 aaKnown RBP14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 PTGISQ16647 500 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 QPCTQ16769 361 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 BMT2Q1RMZ1 405 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 SGO2Q562F6 1265 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 SYCP2LQ5T4T6 812 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 STYK1Q6J9G0 422 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 CCDC121Q6ZUS5 278 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 TMC3Q7Z5M5 1100 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 MYCBPAPQ8TBZ2 947 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 BORCS6Q96GS4 357 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 HES6Q96HZ4 224 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 SEL1LQ9UBV2 794 aa14.68□□□□□ -0.06
PRPF40B-209ENST00000548825 SCN9AQ15858 1988 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 IFNB1P01574 187 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 PSMC4P43686 418 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 PMS2P54278 862 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 MFAP3P55082 362 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 SLC15A2Q16348 729 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 TMEM270Q6UE05 265 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 ERP44Q9BS26 406 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 TMBIM4Q9HC24 238 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 MYOZ2Q9NPC6 264 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 RREB1Q92766 1687 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 HMGB1P1B2RPK0 211 aaPredicted RBP14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 ECHS1P30084 290 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 RPL21P46778 160 aaKnown RBP14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 POLGP54098 1239 aaPredicted RBP14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 SPDYE2Q495Y8 402 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 SV2AQ7L0J3 742 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 EPS8L1Q8TE68 723 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 MTUS1Q9ULD2 1270 aa14.67□□□□□ -0.06
PRPF40B-209ENST00000548825 O00370 1275 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 DDX3YO15523 660 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 HSPA9P38646 679 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 ADCY8P40145 1251 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 PAGR1Q9BTK6 254 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 DDX23Q9BUQ8 820 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 CDK5RAP2Q96SN8 1893 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 DNAH12Q6ZR08 3092 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 WDR64B1ANS9 1081 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 NR3C2P08235 984 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 CYP11B1P15538 503 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 ADSSP30520 456 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 PIK3CAP42336 1068 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 PSMC5P62195 406 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 DYNLT1P63172 113 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 PGM5Q15124 567 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 KRT39Q6A163 491 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 TTC27Q6P3X3 843 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 ANO5Q75V66 913 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 CEP57Q86XR8 500 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 MCF2L2Q86YR7 1114 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 ARFGAP2Q8N6H7 521 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 NEK9Q8TD19 979 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 SCLT1Q96NL6 688 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 NAP1L3Q99457 506 aaPredicted RBP14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 RIT2Q99578 217 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 EPN3Q9H201 632 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 FAM114A2Q9NRY5 505 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 C1orf112Q9NSG2 853 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 MTRF1LQ9UGC7 380 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 TBX20Q9UMR3 447 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 CSDE1O75534 798 aaKnown RBP14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 RRM1P23921 792 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 PPP2R2AP63151 447 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 ORC1Q13415 861 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 PPP2R5AQ15172 486 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 CIAPIN1Q6FI81 312 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 PDCD2LQ9BRP1 358 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 RAB20Q9NX57 234 aa14.66□□□□□ -0.06
PRPF40B-209ENST00000548825 ZNF536O15090 1300 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 SRGAP2CP0DJJ0 459 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 WDR44Q5JSH3 913 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 B4GALNT4Q76KP1 1039 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 ZNF572Q7Z3I7 529 aaPredicted RBP14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 PRELID2Q8N945 189 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 MKNK1Q9BUB5 465 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 PICK1Q9NRD5 415 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 CTNNAL1Q9UBT7 734 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 ZNRF3Q9ULT6 936 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms