RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SMC1AQ14683 1233 aaKnown RBP18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 SLC39A14Q15043 492 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 PLPP4Q5VZY2 271 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 PTCRAQ6ISU1 281 aaPredicted RBP18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 TAS1R3Q7RTX0 852 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 TMC7Q7Z402 723 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 RBM23Q86U06 439 aaKnown RBP18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 FAM193BQ96PV7 902 aaPredicted RBP18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 PLIN2Q99541 437 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 ADPGKQ9BRR6 497 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 GBP3Q9H0R5 595 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 ZBP1Q9H171 429 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 CLEC1BQ9P126 229 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 ODF2LQ9ULJ1 636 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 TNFSF13BQ9Y275 285 aa18.94■□□□□ 0.62
SFSWAP-205ENST00000537164 C2orf71A6NGG8 1288 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 CCDC169A6NNP5 214 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 NRP1O14786 923 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 CTSAP10619 480 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 PLS3P13797 630 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 PLCG1P19174 1290 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 AKAP5P24588 427 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 SCNN1GP51170 649 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 COASYQ13057 564 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 KARSQ15046 597 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 DCAF4L1Q3SXM0 396 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 ATF7IP2Q5U623 682 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 EEF1DP3Q658K8 133 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 VPS52Q8N1B4 723 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 USP28Q96RU2 1077 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 ACO2Q99798 780 aaKnown RBP18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 VN1R3Q9BXE9 311 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 PTPRHQ9HD43 1115 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 KMT5AQ9NQR1 393 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 FAM50BQ9Y247 325 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 USP20Q9Y2K6 914 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 FAN1Q9Y2M0 1017 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 TRIP11Q15643 1979 aa18.93■□□□□ 0.62
SFSWAP-205ENST00000537164 SFI1A8K8P3 1242 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 PER2O15055 1255 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 SSBP05455 408 aaKnown RBP eCLIP18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 IL9P15248 144 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 MARCKSP29966 332 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 NASPP49321 788 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 ZNF131P52739 623 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 GRIK3Q13003 919 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 GIT2Q14161 759 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 EP400NLQ6ZTU2 488 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 FAM178BQ8IXR5 827 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 RNF168Q8IYW5 571 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 TMEM161BQ8NDZ6 487 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 VN1R2Q8NFZ6 395 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 RAD54LQ92698 747 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 EPSTI1Q96J88 318 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 NECAB3Q96P71 396 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 APOL6Q9BWW8 343 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 MARCH5Q9NX47 278 aa18.92■□□□□ 0.62
SFSWAP-205ENST00000537164 MBTPS2O43462 519 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 SCP2P22307 547 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 PROZP22891 400 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 DDIT3P35638 169 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 NDUFV1P49821 464 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 SMTNP53814 917 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 RAD51AP2Q09MP3 1159 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 SMAD4Q13485 552 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 BMS1Q14692 1282 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 SMAD2Q15796 467 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 USP49Q70CQ1 688 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 SMRP1Q8NCR6 262 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 LARP4BQ92615 738 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 MRPL4Q9BYD3 311 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 SNTG2Q9NY99 539 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 LARSQ9P2J5 1176 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 PRKAG3Q9UGI9 489 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 PARP2Q9UGN5 583 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 CD207Q9UJ71 328 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 TRIOO75962 3097 aa18.91■□□□□ 0.62
SFSWAP-205ENST00000537164 ABLIM1O14639 778 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 PTGESO14684 152 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 SLC16A4O15374 487 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 RECQL4O94761 1208 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 BRD1O95696 1058 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 LIG1P18858 919 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 NCKAP1LP55160 1127 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 NAB2Q15742 525 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 TMEM132AQ24JP5 1023 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 APBB1IPQ7Z5R6 666 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 GPBP1Q86WP2 473 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 REEP2Q9BRK0 252 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 STK17AQ9UEE5 414 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 CITO14578 2027 aa18.9■□□□□ 0.62
SFSWAP-205ENST00000537164 NPHP3-ACAD11A0A0J9YXS1 232 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 H0YCG3 227 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 LILRB3O75022 631 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 NR1I2O75469 434 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 CXCL14O95715 111 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 MAPTP10636 758 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 CEBPZQ03701 1054 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 MCM6Q14566 821 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 SPECC1Q5M775 1068 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms