RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 HOXA3O43365 443 aaPredicted RBP5.03□□□□□ -1.6
HDAC2-208ENST00000520746 RAB11FIP3O75154 756 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 CFBP00751 764 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 CDK11BP21127 795 aaKnown RBP5.03□□□□□ -1.6
HDAC2-208ENST00000520746 CD40P25942 277 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 LSP1P33241 339 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 EVA1CP58658 441 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 TAP1Q03518 808 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 ADCY1Q08828 1119 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 EPHA7Q15375 998 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 DDB1Q16531 1140 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 BROXQ5VW32 411 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 ESRP1Q6NXG1 681 aaKnown RBP5.03□□□□□ -1.6
HDAC2-208ENST00000520746 HDGFL2Q7Z4V5 671 aaPredicted RBP5.03□□□□□ -1.6
HDAC2-208ENST00000520746 ZZZ3Q8IYH5 903 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 OR52N2Q8NGI0 321 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 RTF1Q92541 710 aaKnown RBP5.03□□□□□ -1.6
HDAC2-208ENST00000520746 SLC5A5Q92911 643 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 CPPED1Q9BRF8 314 aaPredicted RBP5.03□□□□□ -1.6
HDAC2-208ENST00000520746 SLC46A2Q9BY10 475 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 BRINP2Q9C0B6 783 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 SERHL2Q9H4I8 314 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 ZMAT4Q9H898 229 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 EIF2B4Q9UI10 523 aaKnown RBP5.03□□□□□ -1.6
HDAC2-208ENST00000520746 NOP58Q9Y2X3 529 aaKnown RBP5.03□□□□□ -1.6
HDAC2-208ENST00000520746 COX11Q9Y6N1 276 aa5.03□□□□□ -1.6
HDAC2-208ENST00000520746 MRC2Q9UBG0 1479 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 ARHGEF17Q96PE2 2063 aaPredicted RBP5.02□□□□□ -1.61
HDAC2-208ENST00000520746 A0A0A6YYJ9 748 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.02□□□□□ -1.61
HDAC2-208ENST00000520746 INO80B-WBP1J3KQ70 363 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 GPR39O43194 453 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 ULK1O75385 1050 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 CDKN1CP49918 316 aaPredicted RBP5.02□□□□□ -1.61
HDAC2-208ENST00000520746 ANAPC15P60006 121 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 IGBP1P78318 339 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 TERF2Q15554 542 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 METTL24Q5JXM2 366 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 RNF219Q5W0B1 726 aaPredicted RBP5.02□□□□□ -1.61
HDAC2-208ENST00000520746 IQSEC1Q6DN90 963 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 KANSL1Q7Z3B3 1105 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 RD3Q7Z3Z2 195 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 NME9Q86XW9 330 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 SPATS2Q86XZ4 545 aaKnown RBP5.02□□□□□ -1.61
HDAC2-208ENST00000520746 PRPF38AQ8NAV1 312 aaKnown RBP5.02□□□□□ -1.61
HDAC2-208ENST00000520746 UIMC1Q96RL1 719 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 SOX7Q9BT81 388 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 OSBPL6Q9BZF3 934 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 WDR11Q9BZH6 1224 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 INO80BQ9C086 356 aaPredicted RBP5.02□□□□□ -1.61
HDAC2-208ENST00000520746 MS4A5Q9H3V2 200 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 MTG2Q9H4K7 406 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 ING3Q9NXR8 418 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 ANKFY1Q9P2R3 1169 aa5.02□□□□□ -1.61
HDAC2-208ENST00000520746 NOC2LQ9Y3T9 749 aaKnown RBP5.02□□□□□ -1.61
HDAC2-208ENST00000520746 COL11A2P13942 1736 aaPredicted RBP5.01□□□□□ -1.61
HDAC2-208ENST00000520746 THOC2Q8NI27 1593 aaKnown RBP5.01□□□□□ -1.61
HDAC2-208ENST00000520746 LCHNA4D1U4 455 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 TMEM200CA6NKL6 621 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 APOL3O95236 402 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 GAAP10253 952 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 TYRP1P17643 537 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 APOBEC3AP31941 199 aaPredicted RBP5.01□□□□□ -1.61
HDAC2-208ENST00000520746 FAM50AQ14320 339 aaKnown RBP5.01□□□□□ -1.61
HDAC2-208ENST00000520746 LRRC32Q14392 662 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 VPS72Q15906 364 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 GPR158Q5T848 1215 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 PHYKPLQ8IUZ5 450 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 LILRA3Q8N6C8 439 aaPredicted RBP5.01□□□□□ -1.61
HDAC2-208ENST00000520746 C7orf31Q8N865 590 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 ZNF610Q8N9Z0 462 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 PDCD2LQ9BRP1 358 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 NDC1Q9BTX1 674 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 LSM14BQ9BX40 385 aaKnown RBP5.01□□□□□ -1.61
HDAC2-208ENST00000520746 SYBUQ9NX95 663 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 SLC5A4Q9NY91 659 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 MSRAQ9UJ68 235 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 SYNPO2Q9UMS6 1093 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 PHLDB1Q86UU1 1377 aa5.01□□□□□ -1.61
HDAC2-208ENST00000520746 MROH2BQ7Z745 1585 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 NRP1O14786 923 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 OPHN1O60890 802 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 USP14P54578 494 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 SESN3P58005 492 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 PHC1P78364 1004 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 ADCY2Q08462 1091 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 MAN2A1Q16706 1144 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 TIGD7Q6NT04 549 aaPredicted RBP5□□□□□ -1.61
HDAC2-208ENST00000520746 CCDC62Q6P9F0 684 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 FRMD7Q6ZUT3 714 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 RASSF3Q86WH2 238 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 ARHGEF19Q8IW93 802 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 GLB1L3Q8NCI6 653 aaPredicted RBP5□□□□□ -1.61
HDAC2-208ENST00000520746 CLRN3Q8NCR9 226 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 PIK3C3Q8NEB9 887 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 SUPT20HQ8NEM7 779 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 COG1Q8WTW3 980 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 TRPM5Q9NZQ8 1165 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 CEP164Q9UPV0 1460 aa5□□□□□ -1.61
HDAC2-208ENST00000520746 KIF21AQ7Z4S6 1674 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms