RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 XKR3Q5GH77 459 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 SGMS1Q86VZ5 419 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 RASSF3Q86WH2 238 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 ADGRF4Q8IZF3 695 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 HEXIM2Q96MH2 286 aaKnown RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 AP1M1Q9BXS5 423 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 JPH1Q9HDC5 661 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 ARL2BPQ9Y2Y0 163 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 MANSC4A6NHS7 340 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 NVLO15381 856 aaKnown RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 ACSL3O95573 720 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 NCF2P19878 526 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 SMARCA1P28370 1054 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 CPT1AP50416 773 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 MRPS25P82663 173 aaKnown RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 RGS9BPQ6ZS82 235 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 UNC13DQ70J99 1090 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 TRMT10CQ7L0Y3 403 aaKnown RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 PROM2Q8N271 834 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.01□□□□□ -0.331e-7■■■■■ 78
PCDHGA6-201ENST00000517434 KIF2CQ99661 725 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 AAASQ9NRG9 546 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 DIS3Q9Y2L1 958 aaKnown RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 SNX5Q9Y5X3 404 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 PLEKHA8P1O95397 391 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 MAPK4P31152 587 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 IL1RL1Q01638 556 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 AP1B1Q10567 949 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 NR5A1Q13285 461 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 MXD4Q14582 209 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 OR6B2Q6IFH4 312 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 DDX50Q9BQ39 737 aaKnown RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 TAF1DQ9H5J8 278 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 MID2Q9UJV3 735 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 CAPN11Q9UMQ6 739 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 POLIQ9UNA4 740 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 DEAF1O75398 565 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 TOM1L1O75674 476 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 SERPINI2O75830 405 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 S100BP04271 92 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 KRT8P05787 483 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 TBXAS1P24557 533 aaPredicted RBP13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 SWSAP1Q6NVH7 229 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 LRRC31Q6UY01 552 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 SLC44A5Q8NCS7 719 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 CATSPER1Q8NEC5 780 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 C10orf88Q9H8K7 445 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 PDP2Q9P2J9 529 aa13.01□□□□□ -0.33
PCDHGA6-201ENST00000517434 GPR75-ASB3A0A0A6YYF3 556 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 IQANK1A0A1B0GTG1 560 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 TTI1O43156 1089 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 CTCFP49711 727 aaPredicted RBP13□□□□□ -0.33
PCDHGA6-201ENST00000517434 OLFML2BQ68BL8 750 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 GANCQ8TET4 914 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 DLGAP2Q9P1A6 1054 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 USP32Q8NFA0 1604 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 RASA4BC9J798 803 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 SNAP23O00161 211 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 RASA4O43374 803 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 ZNF543Q08ER8 600 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 KRT31Q15323 416 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 YAF2Q8IY57 180 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 SMYD4Q8IYR2 804 aaPredicted RBP13□□□□□ -0.33
PCDHGA6-201ENST00000517434 TRIM15Q9C019 465 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 MROH8Q9H579 483 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 RHBDL2Q9NX52 303 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 G3BP2Q9UN86 482 aaKnown RBP13□□□□□ -0.33
PCDHGA6-201ENST00000517434 TBX3O15119 743 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 PRPSAP2O60256 369 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 CYP2B6P20813 491 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 LSP1P33241 339 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 PPP4CP60510 307 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 OSTNP61366 133 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 EEF2KMTQ96G04 330 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 CD248Q9HCU0 757 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 TUFT1Q9NNX1 390 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 ABHD10Q9NUJ1 306 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 KDM4FA0A1W2PPD8 638 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 NDUFB10O96000 172 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 BRAFP15056 766 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 GPC3P51654 580 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 RARS2Q5T160 578 aaKnown RBP13□□□□□ -0.33
PCDHGA6-201ENST00000517434 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
PCDHGA6-201ENST00000517434 WDR24Q96S15 920 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 ING2Q9H160 280 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 PCIF1Q9H4Z3 704 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 NOD2Q9HC29 1040 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 MRPL40Q9NQ50 206 aaKnown RBP13□□□□□ -0.33
PCDHGA6-201ENST00000517434 ZNF229Q9UJW7 825 aa13□□□□□ -0.33
PCDHGA6-201ENST00000517434 SYNJ2BP-COX16A0A087WUM0 186 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 GRID2IPA4D2P6 1211 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 E9PMD0 336 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 DYNC1LI2O43237 492 aaPredicted RBP12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 KRT4P19013 534 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 EPHB1P54762 984 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 LAMC2Q13753 1193 aa12.99□□□□□ -0.33
PCDHGA6-201ENST00000517434 FSCBQ5H9T9 825 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms