RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 BTN2A1Q7KYR7 527 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 TTC7BQ86TV6 843 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CPNE8Q86YQ8 564 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 ERC1Q8IUD2 1116 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 RIOX2Q8IUF8 465 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 TEX9Q8N6V9 391 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 GOLGA6L1Q8N7Z2 621 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 AVL9Q8NBF6 648 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CEP70Q8NHQ1 597 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 GOT1L1Q8NHS2 421 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 FAM71BQ8TC56 605 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 STT3BQ8TCJ2 826 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 OTUD7AQ8TE49 926 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 TSPEARQ8WU66 669 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 ZFPM2Q8WW38 1151 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 DLG3Q92796 817 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 FATE1Q969F0 183 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 GTPBP3Q969Y2 492 aaKnown RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CENPTQ96BT3 561 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 IQCDQ96DY2 449 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 ASIC4Q96FT7 647 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 SLC35A4Q96G79 324 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 C16orf92Q96LL3 132 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 MMP19Q99542 508 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 NCAPGQ9BPX3 1015 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 ANP32EQ9BTT0 268 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 MXD3Q9BW11 206 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 ARHGAP39Q9C0H5 1083 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 ASCC2Q9H1I8 757 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CDIP1Q9H305 208 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 POFUT1Q9H488 388 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 MLXIPQ9HAP2 919 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PIDD1Q9HB75 910 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 SAYSD1Q9NPB0 183 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 TM7SF3Q9NS93 570 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PDRG1Q9NUG6 133 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 LMBRD1Q9NUN5 540 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 TOR4AQ9NXH8 423 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 BTG4Q9NY30 223 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 IGSF9Q9P2J2 1179 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 FBXL7Q9UJT9 491 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 DNMT3LQ9UJW3 386 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PCDHGB4Q9UN71 923 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 AP4E1Q9UPM8 1137 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CNPY2Q9Y2B0 182 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 DAGLAQ9Y4D2 1042 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PCDHB1Q9Y5F3 818 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 PCDHGB5Q9Y5G0 923 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 TIMM13Q9Y5L4 95 aaPredicted RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 B3GALT1Q9Y5Z6 326 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 CFAP20Q9Y6A4 193 aaKnown RBP4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 SYNGAP1Q96PV0 1343 aa4.44□□□□□ -1.7
RNU4-60P-201ENST00000517239 C17orf113A0A1B0GUU1 675 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 FAM234BA2RU67 622 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 KRBA1A5PL33 1030 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 TNFRSF10AO00220 468 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 NKRFO15226 690 aaKnown RBP eCLIP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 SPTLC2O15270 562 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 SLC16A6O15403 523 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 TBCAO75347 108 aaKnown RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 LRIG2O94898 1065 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 RPLP2P05387 115 aaKnown RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 ADRB2P07550 413 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 GSTM1P09488 218 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 ATF7P17544 494 aaPredicted RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 RXRAP19793 462 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 CHMP24386 653 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 AOAHP28039 575 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 MAPK4P31152 587 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 CTSKP43235 329 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 CCR5P51681 352 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 HK3P52790 923 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 VAMP2P63027 116 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 NKX6-1P78426 367 aaPredicted RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 FOXO4P98177 505 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 PPARDQ03181 441 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 SPIRE1Q08AE8 756 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 NOGQ13253 232 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 TRIM25Q14258 630 aaKnown RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 WTAPQ15007 396 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 SEC23AQ15436 765 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 RAB30Q15771 203 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 ATP2B3Q16720 1220 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 ZNF468Q5VIY5 522 aaPredicted RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 RRAGBQ5VZM2 374 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 TANGO2Q6ICL3 276 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 LIN54Q6MZP7 749 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 GPAT2Q6NUI2 795 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 RPUSD3Q6P087 351 aaKnown RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 BORAQ6PGQ7 559 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 ZNF765Q7L2R6 523 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 KRT74Q7RTS7 529 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 DYMQ7RTS9 669 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 CATSPER4Q7RTX7 472 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 CCDC91Q7Z6B0 441 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 SDCCAG8Q86SQ7 713 aaPredicted RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 CCDC117Q8IWD4 279 aaPredicted RBP4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 ADGRG2Q8IZP9 1017 aa4.43□□□□□ -1.7
RNU4-60P-201ENST00000517239 NGEFQ8N5V2 710 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms