RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 UBE2Q1Q7Z7E8 422 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 MYLK4Q86YV6 388 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 NIM1KQ8IY84 436 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 BCL6BQ8N143 479 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 NDUFAF2Q8N183 169 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 ANKRD35Q8N283 1001 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 TTC30BQ8N4P2 665 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 DLG3Q92796 817 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 CCDC47Q96A33 483 aaKnown RBP4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 CHMP4CQ96CF2 233 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 CRAMP1Q96RY5 1269 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 ELAC2Q9BQ52 826 aaKnown RBP4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 TTPALQ9BTX7 342 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 SLC52A2Q9HAB3 445 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 CLIC5Q9NZA1 410 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 TAGLN3Q9UI15 199 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 B3GALT1Q9Y5Z6 326 aa4.23□□□□□ -1.73
HMGB3P15-201ENST00000507326 SLC12A8A0AV02 714 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 F2P00734 622 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 RBP3P10745 1247 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 TRIM27P14373 513 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 SDHAP31040 664 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 SSR1P43307 286 aaKnown RBP4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 RAB27AP51159 221 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 ADCY7P51828 1080 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 DCTN1Q14203 1278 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 MINDY4Q4G0A6 757 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 CATSPEREQ5SY80 951 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 PPP4R3AQ6IN85 833 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 KLHDC10Q6PID8 442 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 PCSK4Q6UW60 755 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 Q6ZPA2 131 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 MAATS1Q7Z4T9 603 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 AHI1Q8N157 1196 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 LILRB2Q8N423 598 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 RSPH1Q8WYR4 309 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 NINJ1Q92982 152 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 CCDC34Q96HJ3 373 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 PAWRQ96IZ0 340 aaKnown RBP4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 CDHR1Q96JP9 859 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 RPL10LQ96L21 214 aaKnown RBP4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 LUZP4Q9P127 313 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 ZNF180Q9UJW8 692 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 MAPRE3Q9UPY8 281 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 VWA7Q9Y334 891 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 AFG3L2Q9Y4W6 797 aa4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 RBM8AQ9Y5S9 174 aaKnown RBP4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 SETD1BQ9UPS6 1966 aaKnown RBP4.22□□□□□ -1.73
HMGB3P15-201ENST00000507326 KDM2BQ8NHM5 1336 aa4.21□□□□□ -1.73
HMGB3P15-201ENST00000507326 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 ANO9A1A5B4 782 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 KCNQ2O43526 872 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 AKAP10O43572 662 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 H2AFYO75367 372 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 MAFO75444 373 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 PEX11BO96011 259 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 HALP42357 657 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 ZNF131P52739 623 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 EIF5P55010 431 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 NAP1L1P55209 391 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 BPIFB4P59827 614 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 ALDH6A1Q02252 535 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 FSTL1Q12841 308 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 CHAF1AQ13111 956 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 SMC1AQ14683 1233 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 KRT72Q14CN4 511 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 PRR16Q569H4 304 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 CC2D1BQ5T0F9 858 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 FAM83BQ5T0W9 1011 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 RNF219Q5W0B1 726 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 C1orf228Q6PIY5 440 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 GAREM2Q75VX8 874 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 OVCH1Q7RTY7 1134 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 MORC1Q86VD1 984 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 SUGP1Q8IWZ8 645 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 ULK2Q8IYT8 1036 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 CCAR2Q8N163 923 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 MAGEB6Q8N7X4 407 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 NGDNQ8NEJ9 315 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 SLC7A14Q8TBB6 771 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 GCDHQ92947 438 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 LPPQ93052 612 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 ATP6V1E2Q96A05 226 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 MIEF2Q96C03 454 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 SLC7A6OSQ96CW6 309 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 MTMR8Q96EF0 704 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 SLC39A13Q96H72 371 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 MAGEB10Q96LZ2 347 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 TBATAQ96M53 351 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 PRRX2Q99811 253 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 CELF4Q9BZC1 486 aaKnown RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 LRRC27Q9C0I9 530 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 CDH19Q9H159 772 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 ALDH8A1Q9H2A2 487 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 SLC6A15Q9H2J7 730 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 NRDE2Q9H7Z3 1164 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 PTPRHQ9HD43 1115 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 PLCB1Q9NQ66 1216 aa4.21□□□□□ -1.74
HMGB3P15-201ENST00000507326 GPRC5BQ9NZH0 403 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms