RNA–Protein interactions for RNA: ENST00000505823.5

PRDM2-214, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-214ENST00000505823 COASYQ13057 564 aa13.2□□□□□ -0.3
PRDM2-214ENST00000505823 UBXN11Q5T124 520 aa13.2□□□□□ -0.3
PRDM2-214ENST00000505823 IER5LQ5T953 404 aa13.2□□□□□ -0.3
PRDM2-214ENST00000505823 FAM178BQ8IXR5 827 aa13.2□□□□□ -0.3
PRDM2-214ENST00000505823 SMG8Q8ND04 991 aaKnown RBP13.2□□□□□ -0.3
PRDM2-214ENST00000505823 GAD1Q99259 594 aa13.2□□□□□ -0.3
PRDM2-214ENST00000505823 TCHPQ9BT92 498 aa13.2□□□□□ -0.3
PRDM2-214ENST00000505823 EIF2AQ9BY44 585 aaKnown RBP13.2□□□□□ -0.3
PRDM2-214ENST00000505823 MRPL4Q9BYD3 311 aaKnown RBP13.2□□□□□ -0.3
PRDM2-214ENST00000505823 TMEM134Q9H6X4 195 aa13.2□□□□□ -0.3
PRDM2-214ENST00000505823 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
PRDM2-214ENST00000505823 IRAK3Q9Y616 596 aa13.2□□□□□ -0.3
PRDM2-214ENST00000505823 BRWD1Q9NSI6 2320 aa13.2□□□□□ -0.3
PRDM2-214ENST00000505823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.19□□□□□ -0.3
PRDM2-214ENST00000505823 NT5C1B-RDH14C9J2C7 533 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 PER2O15055 1255 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 INPPL1O15357 1258 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 HIP1RO75146 1068 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 URODP06132 367 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 CTSAP10619 480 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 PBX3P40426 434 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 MLH1P40692 756 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 OR1G1P47890 313 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 PEX3P56589 373 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
PRDM2-214ENST00000505823 SMAD2Q15796 467 aaKnown RBP13.19□□□□□ -0.3
PRDM2-214ENST00000505823 CLUL1Q15846 466 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 AMHR2Q16671 573 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 HYIQ5T013 277 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 ATF7IP2Q5U623 682 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 RINT1Q6NUQ1 792 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 TMEM184AQ6ZMB5 413 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 ADGRD2Q7Z7M1 963 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 SYT2Q8N9I0 419 aaPredicted RBP13.19□□□□□ -0.3
PRDM2-214ENST00000505823 DZANK1Q9NVP4 752 aa13.19□□□□□ -0.3
PRDM2-214ENST00000505823 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.19□□□□□ -0.3
PRDM2-214ENST00000505823 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 RBAK-RBAKDNI3L0D1 243 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 NRP1O14786 923 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 B4GALT5O43286 388 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 MBTPS2O43462 519 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 TADA2AO75478 443 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 THP07101 528 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 PLA2G4BP0C869 781 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 IL9P15248 144 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 SYT1P21579 422 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 CDC25AP30304 524 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 LTBRP36941 435 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 NPTX2P47972 431 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 SLC11A1P49279 550 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 ITIH3Q06033 890 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 ELAVL2Q12926 359 aaKnown RBP13.18□□□□□ -0.3
PRDM2-214ENST00000505823 PDAP1Q13442 181 aaKnown RBP13.18□□□□□ -0.3
PRDM2-214ENST00000505823 ECM1Q16610 540 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 PDXDC1Q6P996 788 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 SPIRE2Q8WWL2 714 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 SNX21Q969T3 373 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 NECTIN4Q96NY8 510 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 CCDC94Q9BW85 323 aaPredicted RBP13.18□□□□□ -0.3
PRDM2-214ENST00000505823 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 ODF2LQ9ULJ1 636 aa13.18□□□□□ -0.3
PRDM2-214ENST00000505823 MEIS3P2A8K0S8 358 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 PP2D1A8MPX8 630 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 TRAPPC3O43617 180 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 STX6O43752 255 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 TBX10O75333 385 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 ADH1AP07327 375 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 PLS3P13797 630 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 AKAP5P24588 427 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 KLRC2P26717 231 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 GTF2F1P35269 517 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.33e-6■■■□□ 16.2
PRDM2-214ENST00000505823 SCNN1GP51170 649 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 TUSC3Q13454 348 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 IL17AQ16552 155 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 C1orf186Q6ZWK4 172 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 COLGALT2Q8IYK4 626 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 GPR65Q8IYL9 337 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 KRI1Q8N9T8 703 aaKnown RBP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 SMRP1Q8NCR6 262 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 RIPOR3Q96MK2 946 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 ZNF396Q96N95 335 aaPredicted RBP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 NECAB3Q96P71 396 aaPredicted RBP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 NTPCRQ9BSD7 190 aaKnown RBP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 ZBP1Q9H171 429 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 NXF3Q9H4D5 531 aaKnown RBP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 PDZD7Q9H5P4 517 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 DNAJB4Q9UDY4 337 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 BARX2Q9UMQ3 279 aaPredicted RBP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 TNFSF13BQ9Y275 285 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 PRG3Q9Y2Y8 225 aaPredicted RBP13.17□□□□□ -0.3
PRDM2-214ENST00000505823 HES2Q9Y543 173 aa13.17□□□□□ -0.3
PRDM2-214ENST00000505823 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
PRDM2-214ENST00000505823 BDP1A6H8Y1 2624 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms