RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 LENG1Q96BZ8 264 aaPredicted RBP12.9□□□□□ -0.34
HCN3-204ENST00000496230 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.34
HCN3-204ENST00000496230 SELENOOQ9BVL4 669 aa12.9□□□□□ -0.34
HCN3-204ENST00000496230 KLHL11Q9NVR0 708 aa12.9□□□□□ -0.34
HCN3-204ENST00000496230 L1RE1Q9UN81 338 aa12.9□□□□□ -0.34
HCN3-204ENST00000496230 SMIM23A6NLE4 172 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 SUPT20HL2P0C7V6 817 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 TXNP10599 105 aaKnown RBP12.89□□□□□ -0.35
HCN3-204ENST00000496230 GLRA2P23416 452 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
HCN3-204ENST00000496230 LBX2Q6XYB7 198 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 TAB3Q8N5C8 712 aaPredicted RBP12.89□□□□□ -0.35
HCN3-204ENST00000496230 OR5B17Q8NGF7 314 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 OR2W6PQ8NHA6 318 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 ZNF516Q92618 1163 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 KRT35Q92764 455 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 HAPLN2Q9GZV7 340 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 NUCKS1Q9H1E3 243 aaKnown RBP12.89□□□□□ -0.35
HCN3-204ENST00000496230 RBPJLQ9UBG7 517 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 NXF1Q9UBU9 619 aaKnown RBP12.89□□□□□ -0.35
HCN3-204ENST00000496230 EIF3JO75822 258 aaKnown RBP12.89□□□□□ -0.35
HCN3-204ENST00000496230 FERP16591 822 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 GGCXP38435 758 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 VPS41P49754 854 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 GTF2BQ00403 316 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 SNX1Q13596 522 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 TMEM270Q6UE05 265 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 TPCN2Q8NHX9 752 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 SPIRE2Q8WWL2 714 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 GPRASP2Q96D09 838 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 AGPAT1Q99943 283 aa12.89□□□□□ -0.35
HCN3-204ENST00000496230 SPATA31C2B4DYI2 1134 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 WEE2P0C1S8 567 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 TCP1P17987 556 aaKnown RBP12.88□□□□□ -0.35
HCN3-204ENST00000496230 ACSF2Q96CM8 615 aaPredicted RBP12.88□□□□□ -0.35
HCN3-204ENST00000496230 DNAJC17Q9NVM6 304 aaKnown RBP12.88□□□□□ -0.35
HCN3-204ENST00000496230 DBR1Q9UK59 544 aaKnown RBP12.88□□□□□ -0.35
HCN3-204ENST00000496230 AGO2Q9UKV8 859 aaKnown RBP12.88□□□□□ -0.35
HCN3-204ENST00000496230 SSC5DA1L4H1 1573 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 GSTTP1A0A1W2PQM5 241 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 RAD51CO43502 376 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 DGAT1O75907 488 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 OATP04181 439 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 PIK3CAP42336 1068 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 JAM2P57087 298 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 BRD3Q15059 726 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 TERF2Q15554 542 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 LMO3Q8TAP4 145 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 PCYT2Q99447 389 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 TRIM51Q9BSJ1 452 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 RAB20Q9NX57 234 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 KIF4AO95239 1232 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 KRT14P02533 472 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 KCNJ1P48048 391 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 TRIP13Q15645 432 aaPredicted RBP12.88□□□□□ -0.35
HCN3-204ENST00000496230 XKR3Q5GH77 459 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 TMEM192Q8IY95 271 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 HEMGNQ9BXL5 484 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 RNPEPQ9H4A4 650 aa12.88□□□□□ -0.35
HCN3-204ENST00000496230 RBAKQ9NYW8 714 aaPredicted RBP12.88□□□□□ -0.35
HCN3-204ENST00000496230 ZNF233A6NK53 670 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 SPOPO43791 374 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 VTNP04004 478 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 MAPTP10636 758 aaKnown RBP12.87□□□□□ -0.35
HCN3-204ENST00000496230 MEI1Q5TIA1 1274 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 KRT39Q6A163 491 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 SH2D3CQ8N5H7 860 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 ZNF653Q96CK0 615 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 MMP19Q99542 508 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
HCN3-204ENST00000496230 CST3P01034 146 aaPredicted RBP12.87□□□□□ -0.35
HCN3-204ENST00000496230 GJA5P36382 358 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 MTM1Q13496 603 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 CCNI2Q6ZMN8 369 aaPredicted RBP12.87□□□□□ -0.35
HCN3-204ENST00000496230 FBXL13Q8NEE6 735 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 NT5C1BQ96P26 610 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 EXOC7Q9UPT5 735 aa12.87□□□□□ -0.35
HCN3-204ENST00000496230 KIAA1217Q5T5P2 1943 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 ANO9A1A5B4 782 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 TTI1O43156 1089 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 LCA5LO95447 670 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 PSMC4P43686 418 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 ATP1A2P50993 1020 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 ZC3H3Q8IXZ2 948 aaKnown RBP12.86□□□□□ -0.35
HCN3-204ENST00000496230 ANKRD13AQ8IZ07 590 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 GPD1LQ8N335 351 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 TSEN2Q8NCE0 465 aaKnown RBP12.86□□□□□ -0.35
HCN3-204ENST00000496230 MSANTD4Q8NCY6 345 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 GOLGA5Q8TBA6 731 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 CPB2Q96IY4 423 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 FAM49AQ9H0Q0 323 aaPredicted RBP12.86□□□□□ -0.35
HCN3-204ENST00000496230 NOC2LQ9Y3T9 749 aaKnown RBP12.86□□□□□ -0.35
HCN3-204ENST00000496230 MCM3APO60318 1980 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 TCRBV7S2A1N4TA0A589 114 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 CLDN3O15551 220 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 STBD1O95210 358 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 TMOD1P28289 359 aa12.86□□□□□ -0.35
HCN3-204ENST00000496230 ALG3Q92685 438 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms