RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 TPH2Q8IWU9 490 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 SLC44A3Q8N4M1 653 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 OXER1Q8TDS5 423 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 ZNF707Q96C28 371 aaPredicted RBP13.73□□□□□ -0.21
SAMM50-205ENST00000493621 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 NAP1L4Q99733 375 aaKnown RBP13.73□□□□□ -0.21
SAMM50-205ENST00000493621 COLEC11Q9BWP8 271 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 RHOBTB2Q9BYZ6 727 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 TRIM6Q9C030 488 aaPredicted RBP13.73□□□□□ -0.21
SAMM50-205ENST00000493621 PIDD1Q9HB75 910 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 XPNPEP1Q9NQW7 623 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 GJB4Q9NTQ9 266 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 EPS15L1Q9UBC2 864 aa13.73□□□□□ -0.21
SAMM50-205ENST00000493621 SRFP11831 508 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 ID4P47928 161 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 SPIRE1Q08AE8 756 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 TFDP1Q14186 410 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 PCBP1Q15365 356 aaKnown RBP eCLIP13.72□□□□□ -0.21
SAMM50-205ENST00000493621 GET4Q7L5D6 327 aaPredicted RBP13.72□□□□□ -0.21
SAMM50-205ENST00000493621 ASAP3Q8TDY4 903 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 HDAC7Q8WUI4 952 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 GPR62Q9BZJ7 368 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 NT5C3AQ9H0P0 336 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 NXF3Q9H4D5 531 aaKnown RBP13.72□□□□□ -0.21
SAMM50-205ENST00000493621 TBC1D17Q9HA65 648 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 CHST7Q9NS84 486 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 GIT1Q9Y2X7 761 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 MYH15Q9Y2K3 1946 aa13.72□□□□□ -0.21
SAMM50-205ENST00000493621 FAM205CA6NFA0 338 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 TGM5O43548 720 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 CDKL5O76039 1030 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 BAG4O95429 457 aaKnown RBP13.71□□□□□ -0.21
SAMM50-205ENST00000493621 XBP1P17861 261 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.21
SAMM50-205ENST00000493621 RPL17P18621 184 aaKnown RBP13.71□□□□□ -0.21
SAMM50-205ENST00000493621 AKAP5P24588 427 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 SCRN1Q12765 414 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 CAPSQ13938 189 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 AMHR2Q16671 573 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 USP41Q3LFD5 358 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 EARS2Q5JPH6 523 aaKnown RBP13.71□□□□□ -0.21
SAMM50-205ENST00000493621 FUT10Q6P4F1 479 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 CDR2LQ86X02 465 aaPredicted RBP13.71□□□□□ -0.21
SAMM50-205ENST00000493621 IFNLR1Q8IU57 520 aaPredicted RBP13.71□□□□□ -0.21
SAMM50-205ENST00000493621 SLFN12Q8IYM2 578 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 HACE1Q8IYU2 909 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 ST13P5Q8NFI4 369 aaPredicted RBP13.71□□□□□ -0.21
SAMM50-205ENST00000493621 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 GPR152Q8TDT2 470 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 RIN2Q8WYP3 895 aaPredicted RBP13.71□□□□□ -0.21
SAMM50-205ENST00000493621 RABGGTAQ92696 567 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 NXPE3Q969Y0 559 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 PLEKHA4Q9H4M7 779 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.71□□□□□ -0.21
SAMM50-205ENST00000493621 PDRG1Q9NUG6 133 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 KLK14Q9P0G3 267 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 ADAM28Q9UKQ2 775 aa13.71□□□□□ -0.21
SAMM50-205ENST00000493621 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 STK36Q9NRP7 1315 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 B4GALT5O43286 388 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 SLITRK3O94933 977 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 NPTXRO95502 500 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 LAMP2P13473 410 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 POU5F1BQ06416 359 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 SPECC1Q5M775 1068 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 GSTCDQ8NEC7 633 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 EIF2AK1Q9BQI3 630 aaKnown RBP13.7□□□□□ -0.22
SAMM50-205ENST00000493621 PRKD2Q9BZL6 878 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 ZDHHC7Q9NXF8 308 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.7□□□□□ -0.22
SAMM50-205ENST00000493621 FNIP2Q9P278 1114 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 CACNG4Q9UBN1 327 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 PARP2Q9UGN5 583 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 R4GN57 208 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 DCHS1Q96JQ0 3298 aa13.7□□□□□ -0.22
SAMM50-205ENST00000493621 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 EP300Q09472 2414 aaPredicted RBP13.69□□□□□ -0.22
SAMM50-205ENST00000493621 EPB41L2O43491 1005 aaKnown RBP13.69□□□□□ -0.22
SAMM50-205ENST00000493621 TADA2AO75478 443 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 DGAT1O75907 488 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 PAPLNO95428 1278 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 C1RP00736 705 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 DCNP07585 359 aaKnown RBP13.69□□□□□ -0.22
SAMM50-205ENST00000493621 GLRA2P23416 452 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 ARL2P36404 184 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 GRIK3Q13003 919 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 HTR4Q13639 388 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 SLC27A1Q6PCB7 646 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 LILRA6Q6PI73 481 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 PRSS55Q6UWB4 352 aaPredicted RBP13.69□□□□□ -0.22
SAMM50-205ENST00000493621 ERMP1Q7Z2K6 904 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
SAMM50-205ENST00000493621 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 ANKEF1Q9NU02 776 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 PCDHA12Q9UN75 941 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 NUMBLQ9Y6R0 609 aa13.69□□□□□ -0.22
SAMM50-205ENST00000493621 FRYLO94915 3013 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms