RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 PCDHGA12O60330 932 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 NCLP19338 710 aaKnown RBP4.23□□□□□ -1.73
RBM28-207ENST00000488249 ECHS1P30084 290 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 SCNN1GP51170 649 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 RABGGTBP53611 331 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 KRT85P78386 507 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 CRHR2Q13324 411 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 RRP1BQ14684 758 aaKnown RBP4.23□□□□□ -1.73
RBM28-207ENST00000488249 ACAP2Q15057 778 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 NOMO1Q15155 1222 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 PCBP2Q15366 365 aaKnown RBP eCLIP4.23□□□□□ -1.73
RBM28-207ENST00000488249 USP39Q53GS9 565 aaKnown RBP4.23□□□□□ -1.73
RBM28-207ENST00000488249 BRDTQ58F21 947 aaPredicted RBP4.23□□□□□ -1.73
RBM28-207ENST00000488249 DBX2Q6ZNG2 339 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 Q6ZRM9 215 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 Q6ZVL8 140 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 PDZD4Q76G19 769 aaPredicted RBP4.23□□□□□ -1.73
RBM28-207ENST00000488249 FAM83AQ86UY5 434 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 MB21D1Q8N884 522 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 OR7D4Q8NG98 312 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 MDM1Q8TC05 714 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 ATXN2LQ8WWM7 1075 aaKnown RBP4.23□□□□□ -1.73
RBM28-207ENST00000488249 JADE3Q92613 823 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 EXTL1Q92935 676 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 CPPED1Q9BRF8 314 aaPredicted RBP4.23□□□□□ -1.73
RBM28-207ENST00000488249 PDCD2LQ9BRP1 358 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 ASPSCR1Q9BZE9 553 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 BCO1Q9HAY6 547 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 AURKAIP1Q9NWT8 199 aaPredicted RBP4.23□□□□□ -1.73
RBM28-207ENST00000488249 PCDHGA9Q9Y5G4 932 aaKnown RBP4.23□□□□□ -1.73
RBM28-207ENST00000488249 PCDHGA8Q9Y5G5 932 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 PCDHGA7Q9Y5G6 932 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 PCDHGA6Q9Y5G7 932 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 PCDHGA3Q9Y5H0 932 aa4.23□□□□□ -1.73
RBM28-207ENST00000488249 TNKSO95271 1327 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 ADCY6O43306 1168 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 XPOTO43592 962 aaKnown RBP4.22□□□□□ -1.73
RBM28-207ENST00000488249 PTPN7P35236 360 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 MAN2A2P49641 1150 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 ANAPC15P60006 121 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 IGBP1P78318 339 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 MGAT2Q10469 447 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 CNGB1Q14028 1251 aaPredicted RBP4.22□□□□□ -1.73
RBM28-207ENST00000488249 PUM1Q14671 1186 aaKnown RBP eCLIP4.22□□□□□ -1.731e-9■□□□□ 9.8
RBM28-207ENST00000488249 PTPN21Q16825 1174 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 NRN1LQ496H8 165 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 DCAF17Q5H9S7 520 aaPredicted RBP4.22□□□□□ -1.73
RBM28-207ENST00000488249 METTL24Q5JXM2 366 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 PRAMEF14Q5SWL7 426 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 C1QL3Q5VWW1 255 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 RNF207Q6ZRF8 634 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 HTR3DQ70Z44 454 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 DOK3Q7L591 496 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 GGNQ86UU5 652 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 TMPRSS6Q8IU80 811 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 C1orf210Q8IVY1 113 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 TRMT2AQ8IZ69 625 aaKnown RBP4.22□□□□□ -1.73
RBM28-207ENST00000488249 PPM1NQ8N819 430 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.22□□□□□ -1.73
RBM28-207ENST00000488249 REPS2Q8NFH8 660 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 IL17DQ8TAD2 202 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 HOXB13Q92826 284 aaPredicted RBP4.22□□□□□ -1.73
RBM28-207ENST00000488249 MNTQ99583 582 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 LSM14BQ9BX40 385 aaKnown RBP4.22□□□□□ -1.73
RBM28-207ENST00000488249 GPR87Q9BY21 358 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 SLC13A1Q9BZW2 595 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 DNM3Q9UQ16 869 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 HDAC5Q9UQL6 1122 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 SPEF1Q9Y4P9 236 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 MRFAP1Q9Y605 127 aa4.22□□□□□ -1.73
RBM28-207ENST00000488249 XDHP47989 1333 aa4.21□□□□□ -1.73
RBM28-207ENST00000488249 KLRG2A4D1S0 409 aaPredicted RBP4.21□□□□□ -1.74
RBM28-207ENST00000488249 GOLGA6L6A8MZA4 724 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 MATN3O15232 486 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 PPM1GO15355 546 aaPredicted RBP4.21□□□□□ -1.74
RBM28-207ENST00000488249 NDUFS2O75306 463 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 ENDOD1O94919 500 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 HK1P19367 917 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 C5AR1P21730 350 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 SREBF1P36956 1147 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 WASP42768 502 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 FLT3LGP49771 235 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 PER3P56645 1201 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 EXOSC10Q01780 885 aaKnown RBP4.21□□□□□ -1.74
RBM28-207ENST00000488249 SEPT2Q15019 361 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 FAM47AQ5JRC9 791 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 MFSD14BQ5SR56 506 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 NAIF1Q69YI7 327 aaPredicted RBP4.21□□□□□ -1.74
RBM28-207ENST00000488249 GPRIN1Q7Z2K8 1008 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 PNMA8AQ86V59 439 aaPredicted RBP4.21□□□□□ -1.74
RBM28-207ENST00000488249 XYLT1Q86Y38 959 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 PQLC1Q8N2U9 271 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 OR52N2Q8NGI0 321 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.21□□□□□ -1.74
RBM28-207ENST00000488249 NRG4Q8WWG1 115 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 CEP95Q96GE4 821 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 TEKT5Q96M29 485 aa4.21□□□□□ -1.74
RBM28-207ENST00000488249 UHRF1Q96T88 793 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms