RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 BICD1Q96G01 975 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 TIGD1Q96MW7 591 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 RNF39Q9H2S5 420 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 NXF3Q9H4D5 531 aaKnown RBP11.87□□□□□ -0.51
ATG4B-219ENST00000479941 TBC1D7Q9P0N9 293 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 KANSL3Q9P2N6 904 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 EXOC7Q9UPT5 735 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 HES2Q9Y543 173 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 ZMYM2Q9UBW7 1377 aa11.87□□□□□ -0.51
ATG4B-219ENST00000479941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-219ENST00000479941 CARNS1A5YM72 827 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 INPPL1O15357 1258 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 CLDN3O15551 220 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 RB1P06400 928 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 LINC00271P0C7V0 271 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 LIG4P49917 911 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 UBE2HP62256 183 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 MCL1Q07820 350 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 EHHADHQ08426 723 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 GRIN2CQ14957 1233 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 NOMO2Q5JPE7 1267 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 FAM26FQ5R3K3 315 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 L1TD1Q5T7N2 865 aaKnown RBP11.86□□□□□ -0.51
ATG4B-219ENST00000479941 TMEM192Q8IY95 271 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 URGCPQ8TCY9 931 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 ARNTL2Q8WYA1 636 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 FAM161BQ96MY7 647 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 ACCSQ96QU6 501 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 C17orf80Q9BSJ5 609 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 PLVAPQ9BX97 442 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 CDT1Q9H211 546 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 TMEM206Q9H813 350 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 AAASQ9NRG9 546 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 TYW1Q9NV66 732 aaKnown RBP11.86□□□□□ -0.51
ATG4B-219ENST00000479941 SNTG2Q9NY99 539 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 PARP2Q9UGN5 583 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 MRPL42Q9Y6G3 142 aaKnown RBP11.86□□□□□ -0.51
ATG4B-219ENST00000479941 MYO9BQ13459 2157 aa11.86□□□□□ -0.51
ATG4B-219ENST00000479941 FNDC1Q4ZHG4 1894 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-219ENST00000479941 ARL5CA6NH57 179 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 C5orf67F2Z3F1 127 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 ABLIM1O14639 778 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 KLRC4O43908 158 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 GADD45BO75293 160 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-219ENST00000479941 MYBP10242 640 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 LAG3P18627 525 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 AKAP5P24588 427 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 BMPR1AP36894 532 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 GRM5P41594 1212 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 PSMD2Q13200 908 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 NOLC1Q14978 699 aaKnown RBP eCLIP11.85□□□□□ -0.51
ATG4B-219ENST00000479941 EPC2Q52LR7 807 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 SPOUT1Q5T280 376 aaKnown RBP11.85□□□□□ -0.51
ATG4B-219ENST00000479941 SLFN12LQ6IEE8 588 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 ZBTB33Q86T24 672 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 ELOA2Q8IYF1 753 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-219ENST00000479941 CCDC47Q96A33 483 aaKnown RBP11.85□□□□□ -0.51
ATG4B-219ENST00000479941 ZBTB45Q96K62 511 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-219ENST00000479941 GBP4Q96PP9 640 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 CCDC94Q9BW85 323 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-219ENST00000479941 APOL6Q9BWW8 343 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 CWH43Q9H720 699 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 CERS4Q9HA82 394 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 TBC1D13Q9NVG8 400 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 MTMR10Q9NXD2 777 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 ANKFY1Q9P2R3 1169 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 HOOK1Q9UJC3 728 aaKnown RBP11.85□□□□□ -0.51
ATG4B-219ENST00000479941 MTUS1Q9ULD2 1270 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 INPP5FQ9Y2H2 1132 aa11.85□□□□□ -0.51
ATG4B-219ENST00000479941 EIF3DO15371 548 aaKnown RBP eCLIP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 KINO60870 393 aaKnown RBP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 PRPF40AO75400 957 aaKnown RBP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 NR1I2O75469 434 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 RECQL4O94761 1208 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 RPN1P04843 607 aaKnown RBP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 CTNNB1P35222 781 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 MLH1P40692 756 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 MATR3P43243 847 aaKnown RBP eCLIP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 CASP5P51878 434 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 YARSP54577 528 aaKnown RBP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 RNASELQ05823 741 aaKnown RBP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 DPYDQ12882 1025 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 POSTNQ15063 836 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 KYAT1Q16773 422 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 KMT5BQ4FZB7 885 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 LRRC55Q6ZSA7 311 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 SPRED2Q7Z698 418 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 THNSL1Q8IYQ7 743 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 CEP120Q8N960 986 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 FBXO22Q8NEZ5 403 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 ZNF507Q8TCN5 953 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 P2RX5Q93086 422 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 HPS3Q969F9 1004 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 FAM193BQ96PV7 902 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 RPS6KC1Q96S38 1066 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 GAD1Q99259 594 aa11.84□□□□□ -0.51
ATG4B-219ENST00000479941 GAS2L1Q99501 681 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 C11orf84Q9BUA3 381 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-219ENST00000479941 FGFBP2Q9BYJ0 223 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms