RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 PPM1AP35813 382 aa25.56■■□□□ 1.68
SUMO3-205ENST00000466861 GPM6BQ13491 265 aa25.56■■□□□ 1.68
SUMO3-205ENST00000466861 SPOUT1Q5T280 376 aaKnown RBP25.56■■□□□ 1.68
SUMO3-205ENST00000466861 MPZL3Q6UWV2 235 aa25.56■■□□□ 1.68
SUMO3-205ENST00000466861 CDR2LQ86X02 465 aaPredicted RBP25.56■■□□□ 1.68
SUMO3-205ENST00000466861 MAP4K3Q8IVH8 894 aa25.56■■□□□ 1.68
SUMO3-205ENST00000466861 GDPD2Q9HCC8 539 aa25.56■■□□□ 1.68
SUMO3-205ENST00000466861 MTUS1Q9ULD2 1270 aa25.56■■□□□ 1.68
SUMO3-205ENST00000466861 CHD7Q9P2D1 2997 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 MEIS3P2A8K0S8 358 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 ACTN4O43707 911 aaKnown RBP25.55■■□□□ 1.68
SUMO3-205ENST00000466861 PPP1R37O75864 691 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 UBE3AQ05086 875 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 ADGRE1Q14246 886 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 PTPROQ16827 1216 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 ZNF568Q3ZCX4 644 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 HERC4Q5GLZ8 1057 aaPredicted RBP25.55■■□□□ 1.68
SUMO3-205ENST00000466861 COLGALT1Q8NBJ5 622 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 STRA6Q9BX79 667 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 MRPL44Q9H9J2 332 aaKnown RBP25.55■■□□□ 1.68
SUMO3-205ENST00000466861 TBC1D13Q9NVG8 400 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 HES2Q9Y543 173 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 PCDHB13Q9Y5F0 798 aa25.55■■□□□ 1.68
SUMO3-205ENST00000466861 TDRD15B5MCY1 1934 aaKnown RBP25.55■■□□□ 1.68
SUMO3-205ENST00000466861 PVALEFA0A1B0GWK0 134 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 GOLGA6L4A6NEF3 574 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 ARL5CA6NH57 179 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 ABLIM1O14639 778 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 NMT1P30419 496 aaKnown RBP25.54■■□□□ 1.68
SUMO3-205ENST00000466861 GRM5P41594 1212 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 NDUFA8P51970 172 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 KYAT1Q16773 422 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 STXBP4Q6ZWJ1 553 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 UNC13DQ70J99 1090 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 FSIP1Q8NA03 581 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 CCDC34Q96HJ3 373 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 ZNF558Q96NG5 402 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 CDT1Q9H211 546 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 RNF39Q9H2S5 420 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 SERTAD1Q9UHV2 236 aa25.54■■□□□ 1.68
SUMO3-205ENST00000466861 ASIC1P78348 528 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 RNASELQ05823 741 aaKnown RBP25.53■■□□□ 1.68
SUMO3-205ENST00000466861 MCL1Q07820 350 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 LONRF3Q496Y0 759 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 KCNT2Q6UVM3 1135 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 GDPD5Q8WTR4 605 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 STAMQ92783 540 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 MRPL38Q96DV4 380 aaKnown RBP25.53■■□□□ 1.68
SUMO3-205ENST00000466861 GAD1Q99259 594 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 TMEM175Q9BSA9 504 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 TCHPQ9BT92 498 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 CCDC94Q9BW85 323 aaPredicted RBP25.53■■□□□ 1.68
SUMO3-205ENST00000466861 PLAGL2Q9UPG8 496 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 EXOC7Q9UPT5 735 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 LZTS1Q9Y250 596 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 INPP5FQ9Y2H2 1132 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 USP20Q9Y2K6 914 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 PRRC2BQ5JSZ5 2229 aaKnown RBP25.53■■□□□ 1.68
SUMO3-205ENST00000466861 CITO14578 2027 aa25.53■■□□□ 1.68
SUMO3-205ENST00000466861 RFXAPO00287 272 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 CLDN3O15551 220 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 ALDH7A1P49419 539 aaKnown RBP25.52■■□□□ 1.68
SUMO3-205ENST00000466861 LIG4P49917 911 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 PLCB3Q01970 1234 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 COASYQ13057 564 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 NOLC1Q14978 699 aaKnown RBP eCLIP25.52■■□□□ 1.68
SUMO3-205ENST00000466861 BICD1Q96G01 975 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 APOL6Q9BWW8 343 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 NRDE2Q9H7Z3 1164 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 PARP2Q9UGN5 583 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 MTCH2Q9Y6C9 303 aa25.52■■□□□ 1.68
SUMO3-205ENST00000466861 HNRNPDLO14979 420 aaKnown RBP25.51■■□□□ 1.67
SUMO3-205ENST00000466861 IGFBP4P22692 258 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 AKAP5P24588 427 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 MLH1P40692 756 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 GRIK3Q13003 919 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 SLFN12LQ6IEE8 588 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 KANK3Q6NY19 840 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 KLHL23Q8NBE8 558 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 PAGE5Q96GU1 130 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 FAM193BQ96PV7 902 aaPredicted RBP25.51■■□□□ 1.67
SUMO3-205ENST00000466861 RPS6KC1Q96S38 1066 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 TOPORSQ9NS56 1045 aaPredicted RBP25.51■■□□□ 1.67
SUMO3-205ENST00000466861 SNTG2Q9NY99 539 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 SPG21Q9NZD8 308 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 STK39Q9UEW8 545 aa25.51■■□□□ 1.67
SUMO3-205ENST00000466861 RECQL4O94761 1208 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 ITGB1P05556 798 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 BCAR1P56945 870 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 EHHADHQ08426 723 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 DSC1Q08554 894 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 L1TD1Q5T7N2 865 aaKnown RBP25.5■■□□□ 1.67
SUMO3-205ENST00000466861 GSTCDQ8NEC7 633 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 SPPL3Q8TCT6 385 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 IPO9Q96P70 1041 aaKnown RBP25.5■■□□□ 1.67
SUMO3-205ENST00000466861 ACCSQ96QU6 501 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 TMEM206Q9H813 350 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 STYXL1Q9Y6J8 313 aa25.5■■□□□ 1.67
SUMO3-205ENST00000466861 TRIP11Q15643 1979 aa25.49■■□□□ 1.67
SUMO3-205ENST00000466861 EIF3DO15371 548 aaKnown RBP eCLIP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms