RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 PCDH10Q9P2E7 1040 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 GIT1Q9Y2X7 761 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 IPPQ9Y573 584 aa6.98□□□□□ -1.29
SF3B1-206ENST00000462613 TULP1O00294 542 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 OGTO15294 1046 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 CALUO43852 315 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 DGKIO75912 1065 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 PRPF6O94906 941 aaKnown RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 RHOBTB3O94955 611 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 PIGRP01833 764 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 MYBP10242 640 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 GARTP22102 1010 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 CASP1P29466 404 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 HOXA11P31270 313 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 FAM189BP81408 668 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 HTRA4P83105 476 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 DPYDQ12882 1025 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 PNOCQ13519 176 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 SNW1Q13573 536 aaKnown RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 BMS1Q14692 1282 aaKnown RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 AMHR2Q16671 573 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 PAN2Q504Q3 1202 aaKnown RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 ZC2HC1CQ53FD0 456 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 HABP4Q5JVS0 413 aaKnown RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 NT5DC1Q5TFE4 455 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 GPR153Q6NV75 609 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 ZBTB33Q86T24 672 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 USP37Q86T82 979 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 RTN4RL1Q86UN2 441 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 CDR2LQ86X02 465 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 THNSL1Q8IYQ7 743 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 TRIML1Q8N9V2 468 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 NOC3LQ8WTT2 800 aaKnown RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 LINC01599Q8WXQ3 324 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 VWCEQ96DN2 955 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 ACAP3Q96P50 834 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 TSG101Q99816 390 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 PBX4Q9BYU1 374 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 OSBPL7Q9BZF2 842 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 KIAA1586Q9HCI6 787 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 LMBRD1Q9NUN5 540 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 SLC38A7Q9NVC3 462 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 DACH1Q9UI36 760 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 INPP5FQ9Y2H2 1132 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 R3HCC1Q9Y3T6 440 aaKnown RBP6.97□□□□□ -1.29
SF3B1-206ENST00000462613 PCDHB12Q9Y5F1 795 aa6.97□□□□□ -1.29
SF3B1-206ENST00000462613 PLXNA4Q9HCM2 1894 aa6.96□□□□□ -1.29
SF3B1-206ENST00000462613 PSMA7O14818 248 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 PPP1R37O75864 691 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 RECQL4O94761 1208 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 THP07101 528 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 CA3P07451 260 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 CLTAP09496 248 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 PRR29P0C7W0 189 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 LAG3P18627 525 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 RPL13P26373 211 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 MCM4P33991 863 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 PPM1AP35813 382 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 GRM5P41594 1212 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 ALDH7A1P49419 539 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 RABGGTBP53611 331 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 OSTNP61366 133 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 POU5F1Q01860 360 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 PPP2R3AQ06190 1150 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 MCL1Q07820 350 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 GRIK3Q13003 919 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 SURF1Q15526 300 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 CAMK4Q16566 473 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 KNOP1Q1ED39 458 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 TCTN1Q2MV58 587 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 NOMO2Q5JPE7 1267 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 ZNF658Q5TYW1 1059 aaPredicted RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 TAS1R3Q7RTX0 852 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 MRPL10Q7Z7H8 261 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 ZNF598Q86UK7 904 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 CD302Q8IX05 232 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 NELFCDQ8IXH7 590 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 GUF1Q8N442 669 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 ZNF507Q8TCN5 953 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 HELQQ8TDG4 1101 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 LPPQ93052 612 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 TGS1Q96RS0 853 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 TSPAN18Q96SJ8 248 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 PLVAPQ9BX97 442 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 EIF2AQ9BY44 585 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 CDT1Q9H211 546 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 NXF3Q9H4D5 531 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 RPF1Q9H9Y2 349 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 TYW1Q9NV66 732 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 SNTG2Q9NY99 539 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 STK39Q9UEW8 545 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 AGO2Q9UKV8 859 aaKnown RBP6.96□□□□□ -1.3
SF3B1-206ENST00000462613 GDAQ9Y2T3 454 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 PCDHA5Q9Y5H7 936 aa6.96□□□□□ -1.3
SF3B1-206ENST00000462613 A0A0B4J269 797 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 BICDL2A1A5D9 508 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 ARL5CA6NH57 179 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 GRXCR1A8MXD5 290 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 PDXKO00764 312 aa6.95□□□□□ -1.3
SF3B1-206ENST00000462613 KLRC4O43908 158 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms