RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 BCO2Q9BYV7 579 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 EPC1Q9H2F5 836 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 DHX33Q9H6R0 707 aaKnown RBP19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 UBN1Q9NPG3 1134 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 VPS54Q9P1Q0 977 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 CDH7Q9ULB5 785 aa19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 SMG5Q9UPR3 1016 aaKnown RBP19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 ZFP37Q9Y6Q3 630 aaPredicted RBP19.23■□□□□ 0.67
UBE2D4-209ENST00000454428 CPA1P15085 419 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 CD72P21854 359 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 PSMC5P62195 406 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 LAMTOR4Q0VGL1 99 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 SLC44A4Q53GD3 710 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 FUT10Q6P4F1 479 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 GPR65Q8IYL9 337 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 OSBPL6Q9BZF3 934 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 PARD6AQ9NPB6 346 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 FBXW11Q9UKB1 542 aa19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 NAP1L2Q9ULW6 460 aaPredicted RBP19.22■□□□□ 0.67
UBE2D4-209ENST00000454428 ARID2Q68CP9 1835 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 DCDC2BA2VCK2 349 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 FAM170BA6NMN3 283 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 TSPAN1O60635 241 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 PRKCQQ04759 706 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 UBXN2BQ14CS0 331 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 USP41Q3LFD5 358 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 RNF20Q5VTR2 975 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 TSSK4Q6SA08 328 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 PRSS55Q6UWB4 352 aaPredicted RBP19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 GPR161Q8N6U8 529 aaKnown RBP19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 CNNM3Q8NE01 707 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 RABGGTAQ92696 567 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 FGF13Q92913 245 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 JPH2Q9BR39 696 aaPredicted RBP19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 LTB4R2Q9NPC1 389 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 CACNG4Q9UBN1 327 aa19.21■□□□□ 0.67
UBE2D4-209ENST00000454428 CCDC196A0A1B0GTZ2 297 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 SHISA7A6NL88 538 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 SDHBP21912 280 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 FZD5Q13467 585 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 RTP2Q5QGT7 225 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 ITFG1Q8TB96 612 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 ATRIPQ8WXE1 791 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 PSPC1Q8WXF1 523 aaKnown RBP19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 SLC7A3Q8WY07 619 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 CLDN23Q96B33 292 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 CPB2Q96IY4 423 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 COLEC11Q9BWP8 271 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 BMP2KQ9NSY1 1161 aaPredicted RBP19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 ZSCAN32Q9NX65 697 aa19.2■□□□□ 0.66
UBE2D4-209ENST00000454428 PRR5-ARHGAP8B1AHC4 643 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 M0R2N6 131 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 TARSP26639 723 aaKnown RBP19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 ARHGAP8P85298 464 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 LMNB2Q03252 620 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 FERMT3Q86UX7 667 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 RNF149Q8NC42 400 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 CCDC148Q8NFR7 591 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 PAAF1Q9BRP4 392 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 NXF3Q9H4D5 531 aaKnown RBP19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 PRMT8Q9NR22 394 aaPredicted RBP19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 ADAM28Q9UKQ2 775 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 VAV3Q9UKW4 847 aa19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 CDV3Q9UKY7 258 aaKnown RBP19.19■□□□□ 0.66
UBE2D4-209ENST00000454428 VWA8A3KMH1 1905 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 ADRB1P08588 477 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 QARSP47897 775 aaKnown RBP19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 AMHR2Q16671 573 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 POTEHQ6S545 545 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 RSPO2Q6UXX9 243 aaPredicted RBP19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 MTSS1LQ765P7 747 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 CEP170P1Q96L14 293 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 KXD1Q9BQD3 176 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 CLSTN3Q9BQT9 956 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 RTKNQ9BST9 563 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 APOL6Q9BWW8 343 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 RNF26Q9BY78 433 aaPredicted RBP19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 GIT1Q9Y2X7 761 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 CACNA1GO43497 2377 aa19.18■□□□□ 0.66
UBE2D4-209ENST00000454428 ASPMQ8IZT6 3477 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 SLC37A4O43826 429 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 TDGF1P13385 188 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 MAGEA9P43362 315 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 PPP2R5CQ13362 524 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 NPY5RQ15761 445 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 ST3GAL2Q16842 350 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 ZBTB41Q5SVQ8 909 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 Q6ZUG5 572 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 ZNF687Q8N1G0 1237 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 BRF1Q92994 677 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 SLC26A6Q9BXS9 759 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 CSRNP2Q9H175 543 aa19.17■□□□□ 0.66
UBE2D4-209ENST00000454428 ZBTB39O15060 712 aa19.16■□□□□ 0.66
UBE2D4-209ENST00000454428 CCL16O15467 120 aa19.16■□□□□ 0.66
UBE2D4-209ENST00000454428 ADAM12O43184 909 aa19.16■□□□□ 0.66
UBE2D4-209ENST00000454428 NR1I2O75469 434 aa19.16■□□□□ 0.66
UBE2D4-209ENST00000454428 ERLIN2O94905 339 aa19.16■□□□□ 0.66
UBE2D4-209ENST00000454428 HNRNPA1P09651 372 aaKnown RBP eCLIP19.16■□□□□ 0.66
UBE2D4-209ENST00000454428 AKAP5P24588 427 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms