RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TSPY10P0CW01 314 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ZSCAN22P10073 491 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TROVE2P10155 538 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TGFB3P10600 412 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ID4P47928 161 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CTCFP49711 727 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ACADVLP49748 655 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 GEMIN4P57678 1058 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 BPIFB4P59827 614 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ARPC4P59998 168 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CDK17Q00537 523 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CYP4A11Q02928 519 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 PIN1Q13526 163 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 UBE4AQ14139 1066 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SPIDRQ14159 915 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 THOC7Q6I9Y2 204 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 OR52E8Q6IFG1 317 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 DENND5AQ6IQ26 1287 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 STYK1Q6J9G0 422 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ZCCHC8Q6NZY4 707 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ARMCX5Q6P1M9 558 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 IGF2-ASQ6U949 168 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SEPT14Q6ZU15 432 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ACAD11Q709F0 780 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 UBE2R2Q712K3 238 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 C14orf80Q86SX3 495 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TTC30AQ86WT1 665 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 LURAP1LQ8IV03 231 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TMEM139Q8IV31 216 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 PASD1Q8IV76 773 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SLC7A5P1Q8MH63 180 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TTC39CQ8N584 583 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ESX1Q8N693 406 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CNTD1Q8N815 330 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 IGSF22Q8N9C0 903 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 C12orf50Q8NA57 414 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 C2CD4AQ8NCU7 369 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TTC8Q8TAM2 541 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 DEPTORQ8TB45 409 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 PI4K2BQ8TCG2 481 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 BCAS4Q8TDM0 211 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 RNF141Q8WVD5 230 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 USP7Q93009 1102 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 LRRC45Q96CN5 670 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 HVCN1Q96D96 273 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 C8orf76Q96K31 380 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 JAKMIP1Q96N16 626 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CAMKK2Q96RR4 588 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TESK2Q96S53 571 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 RUFY1Q96T51 708 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 PNKPQ96T60 521 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SMAD5Q99717 465 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 YIPF4Q9BSR8 244 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ASPNQ9BXN1 380 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 RTFDC1Q9BY42 306 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TRIM5Q9C035 493 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 YIPF3Q9GZM5 350 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 PRDM14Q9GZV8 571 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 NDST4Q9H3R1 872 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CLSTN2Q9H4D0 955 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 RABEP2Q9H5N1 569 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 NOL6Q9H6R4 1146 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 RPAP3Q9H6T3 665 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CLK4Q9HAZ1 481 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 NOD2Q9HC29 1040 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 PREBQ9HCU5 417 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CYP26B1Q9NR63 512 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 INIPQ9NRY2 104 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 IL20Q9NYY1 176 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 NDUFA13Q9P0J0 144 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ZMAT5Q9UDW3 170 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SWAP70Q9UH65 585 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 FBXL21Q9UKT6 434 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TRHDEQ9UKU6 1024 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 PAIP2BQ9ULR5 123 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 APOBEC2Q9Y235 224 aaKnown RBP3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SH3GLB1Q9Y371 365 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 C2CD2Q9Y426 696 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 TRAF6Q9Y4K3 522 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 SPEF1Q9Y4P9 236 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 LRRC42Q9Y546 428 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CC2D2AQ9P2K1 1620 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 ADGRB3O60242 1522 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 DAPK1P53355 1430 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 CARMIL2Q6F5E8 1435 aa3.95□□□□□ -1.78
HMGB3P8-201ENST00000449709 GLI2P10070 1586 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 NEURL4Q96JN8 1562 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 CFTRP13569 1480 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 SBNO1A3KN83 1393 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 DISP3Q9P2K9 1392 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 PLEKHG1Q9ULL1 1385 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 HTR3EA5X5Y0 456 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 TTC34A8MYJ7 566 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 E7ENQ6 273 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 AQP7O14520 342 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 VAMP4O75379 141 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 KIAA0754O94854 1291 aa3.94□□□□□ -1.78
HMGB3P8-201ENST00000449709 SNRPB2P08579 225 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms