RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 WDR4P57081 412 aaKnown RBP14.94□□□□□ -0.02
VPS52-212ENST00000445902 STRN3Q13033 797 aa14.94□□□□□ -0.02
VPS52-212ENST00000445902 CCDC6Q16204 474 aa14.94□□□□□ -0.02
VPS52-212ENST00000445902 PARP6Q2NL67 630 aa14.94□□□□□ -0.02
VPS52-212ENST00000445902 FAM186BQ8IYM0 893 aa14.94□□□□□ -0.02
VPS52-212ENST00000445902 AGGF1Q8N302 714 aaeCLIP14.94□□□□□ -0.02
VPS52-212ENST00000445902 STK33Q9BYT3 514 aa14.94□□□□□ -0.02
VPS52-212ENST00000445902 DNAJC18Q9H819 358 aa14.94□□□□□ -0.02
VPS52-212ENST00000445902 WDR35Q9P2L0 1181 aa14.94□□□□□ -0.02
VPS52-212ENST00000445902 PHTF1Q9UMS5 762 aa14.94□□□□□ -0.02
VPS52-212ENST00000445902 ASB3Q9Y575 518 aa14.94□□□□□ -0.02
VPS52-212ENST00000445902 BCL9O00512 1426 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 A0A1W2PRG0 241 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 FOXN3O00409 490 aaPredicted RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 LDHBP07195 334 aaKnown RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 CYP2J2P51589 502 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 KHDC1Q4VXA5 237 aaKnown RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 ZC2HC1CQ53FD0 456 aaPredicted RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 FOXB2Q5VYV0 432 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 TTBK2Q6IQ55 1244 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 NSMFQ6X4W1 530 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 SMIM5Q71RC9 77 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 EPM2AIP1Q7L775 607 aaPredicted RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 CATSPER3Q86XQ3 398 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 SLC13A5Q86YT5 568 aaPredicted RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.93□□□□□ -0.02
VPS52-212ENST00000445902 FAM118BQ9BPY3 351 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 CCDC87Q9NVE4 849 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 MTUS1Q9ULD2 1270 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 RASA4BC9J798 803 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 PDXKO00764 312 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 NVLO15381 856 aaKnown RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 RASA4O43374 803 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 TTC4O95801 387 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 HOXA7P31268 230 aaPredicted RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 ZC3H18Q86VM9 953 aaKnown RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 METTL14Q9HCE5 456 aaKnown RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 ACP6Q9NPH0 428 aa14.93□□□□□ -0.02
VPS52-212ENST00000445902 TYW1Q9NV66 732 aaKnown RBP14.93□□□□□ -0.02
VPS52-212ENST00000445902 NAV1Q8NEY1 1877 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 RAD21O60216 631 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 GCLCP48506 637 aaPredicted RBP14.92□□□□□ -0.02
VPS52-212ENST00000445902 FMO5P49326 533 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 ERFP50548 548 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 ITGA8P53708 1063 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 MKRN3Q13064 507 aaKnown RBP14.92□□□□□ -0.02
VPS52-212ENST00000445902 CYP4F22Q6NT55 531 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 DTX3LQ8TDB6 740 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 LRRC8CQ8TDW0 803 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 ANKRD27Q96NW4 1050 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 EPAS1Q99814 870 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 SYT11Q9BT88 431 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 MXD3Q9BW11 206 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 ACADSP16219 412 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 RPL13P26373 211 aaKnown RBP14.92□□□□□ -0.02
VPS52-212ENST00000445902 CNGA1P29973 690 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 NMT1P30419 496 aaKnown RBP14.92□□□□□ -0.02
VPS52-212ENST00000445902 CCDC15Q0P6D6 951 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 TAF1BQ53T94 588 aaPredicted RBP14.92□□□□□ -0.02
VPS52-212ENST00000445902 HP1BP3Q5SSJ5 553 aaPredicted RBP14.92□□□□□ -0.02
VPS52-212ENST00000445902 HYIQ5T013 277 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 CYFIP1Q7L576 1253 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 KIFAP3Q92845 792 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 NINJ2Q9NZG7 142 aa14.92□□□□□ -0.02
VPS52-212ENST00000445902 G3BP2Q9UN86 482 aaKnown RBP14.92□□□□□ -0.02
VPS52-212ENST00000445902 FAM196BA6NMK8 535 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 MIF4GDA9UHW6 222 aaKnown RBP14.91□□□□□ -0.02
VPS52-212ENST00000445902 MAPK13O15264 365 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 RNF8O76064 485 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 HSPA6P17066 643 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 RANBP1P43487 201 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 IL9RQ01113 521 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 ACVR2BQ13705 512 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 SIX1Q15475 284 aaPredicted RBP14.91□□□□□ -0.02
VPS52-212ENST00000445902 SLC5A9Q2M3M2 681 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 ZNF568Q3ZCX4 644 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 TMEM63BQ5T3F8 832 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 CAPN12Q6ZSI9 719 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 NEDD1Q8NHV4 660 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 B4GALNT2Q8NHY0 566 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 GPR101Q96P66 508 aaPredicted RBP14.91□□□□□ -0.02
VPS52-212ENST00000445902 AGPAT1Q99943 283 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 INTS2Q9H0H0 1204 aaKnown RBP14.91□□□□□ -0.02
VPS52-212ENST00000445902 BHMT2Q9H2M3 363 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 CHST7Q9NS84 486 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 ROBO3Q96MS0 1386 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 RBM5P52756 815 aaKnown RBP eCLIP14.91□□□□□ -0.02
VPS52-212ENST00000445902 LBRQ14739 615 aaKnown RBP14.91□□□□□ -0.02
VPS52-212ENST00000445902 RCN1Q15293 331 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 SGO2Q562F6 1265 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 OR52E8Q6IFG1 317 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 MTHFD1LQ6UB35 978 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 RHOT2Q8IXI1 618 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 RBBP8NLQ8NC74 664 aaPredicted RBP14.91□□□□□ -0.02
VPS52-212ENST00000445902 EZH1Q92800 747 aaPredicted RBP14.91□□□□□ -0.02
VPS52-212ENST00000445902 FGD4Q96M96 766 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 PCMTD2Q9NV79 361 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 USH1CQ9Y6N9 552 aa14.91□□□□□ -0.02
VPS52-212ENST00000445902 ATP8B3O60423 1300 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms