RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PPP1R14CQ8TAE6 165 aa15.11■□□□□ 0.01
SMARCA4-204ENST00000444061 YME1L1Q96TA2 773 aa15.11■□□□□ 0.01
SMARCA4-204ENST00000444061 KLK14Q9P0G3 267 aa15.11■□□□□ 0.01
SMARCA4-204ENST00000444061 SAR1BQ9Y6B6 198 aa15.11■□□□□ 0.01
SMARCA4-204ENST00000444061 SLITRK3O94933 977 aa15.11■□□□□ 0.01
SMARCA4-204ENST00000444061 GHRP10912 638 aa15.11■□□□□ 0.01
SMARCA4-204ENST00000444061 PASD1Q8IV76 773 aa15.11■□□□□ 0.01
SMARCA4-204ENST00000444061 NKX2-3Q8TAU0 364 aa15.11■□□□□ 0.01
SMARCA4-204ENST00000444061 GOLGA6CA6NDK9 693 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 GOLGA6BA6NDN3 693 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 TUBBP07437 444 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 GOLGA6DP0CG33 693 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 PRMT2P55345 433 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 GIT2Q14161 759 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 SV2CQ496J9 727 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 KAZNQ674X7 775 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 COLEC11Q9BWP8 271 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 NHEJ1Q9H9Q4 299 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 GOLGA6AQ9NYA3 693 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 CRHR2Q13324 411 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 MPZL3Q6UWV2 235 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 SPATA2LQ8IUW3 424 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 SLAIN1Q8ND83 568 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 BTAF1O14981 1849 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 IGKV6D-41A0A0C4DH26 115 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 SREK1Q8WXA9 508 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 NRBP1Q9UHY1 535 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 ARL1P40616 181 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 PDE11AQ9HCR9 933 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 AGPAT3Q9NRZ7 376 aa15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 V9GYY5 206 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-204ENST00000444061 PLIN4Q96Q06 1357 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 EML1O00423 815 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 PSMC6P62333 389 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 EHHADHQ08426 723 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 PPP2R5DQ14738 602 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 STRIP2Q9ULQ0 834 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 NRCAMQ92823 1304 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 AOC2O75106 756 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 TCP1P17987 556 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 GJC2Q5T442 439 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 BSPRYQ5W0U4 402 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 RFX6Q8HWS3 928 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 CCDC60Q8IWA6 550 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 CD302Q8IX05 232 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 C17orf53Q8N3J3 647 aaPredicted RBP15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 KBTBD4Q9NVX7 518 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 SEPT10Q9P0V9 454 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.09■□□□□ 0.015e-6■□□□□ 10.3
SMARCA4-204ENST00000444061 PCSK1P29120 753 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 FMO5P49326 533 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 HSD17B4P51659 736 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 ILDR2Q71H61 639 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 SPTLC3Q9NUV7 552 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 SPATA31C2B4DYI2 1134 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 H7C0C1 242 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 PEX10O60683 326 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 MFAP3LO75121 409 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 CALB1P05937 261 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 ATP5OP48047 213 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 CDO1Q16878 200 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 PAN2Q504Q3 1202 aaKnown RBP15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 GLRA4Q5JXX5 417 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 CASC4Q6P4E1 433 aa15.09■□□□□ 0.01
SMARCA4-204ENST00000444061 NFASCO94856 1347 aa15.08■□□□□ 0.01
SMARCA4-204ENST00000444061 COL18A1P39060 1754 aa15.08■□□□□ 0.01
SMARCA4-204ENST00000444061 NDC80O14777 642 aa15.08■□□□□ 0.01
SMARCA4-204ENST00000444061 CSDE1O75534 798 aaKnown RBP15.08■□□□□ 0.01
SMARCA4-204ENST00000444061 PNPLA4P41247 253 aa15.08■□□□□ 0.01
SMARCA4-204ENST00000444061 FMR1Q06787 632 aaKnown RBP eCLIP15.08■□□□□ 0.014e-7■■■□□ 18.6
SMARCA4-204ENST00000444061 NCAPGQ9BPX3 1015 aa15.08■□□□□ 0.01
SMARCA4-204ENST00000444061 C11orf70Q9BRQ4 267 aa15.08■□□□□ 0.01
SMARCA4-204ENST00000444061 MAGED2Q9UNF1 606 aaPredicted RBP15.08■□□□□ 0.01
SMARCA4-204ENST00000444061 ARFGEF2Q9Y6D5 1785 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 LRRC53A6NM62 1247 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 B3GAT3O94766 335 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 GBP1P32455 592 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 TAF6P49848 677 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 SOX10P56693 466 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 DUSP28Q4G0W2 176 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 SH3D19Q5HYK7 790 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 RPUSD2Q8IZ73 545 aaKnown RBP15.08■□□□□ 0
SMARCA4-204ENST00000444061 CALN1Q9BXU9 219 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 TRPV2Q9Y5S1 764 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 HLA-DRAP01903 254 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 ITGB5P18084 799 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 PPP2R5EQ16537 467 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 DCP1BQ8IZD4 617 aaKnown RBP15.08■□□□□ 0
SMARCA4-204ENST00000444061 PANX2Q96RD6 677 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 STAP1Q9ULZ2 295 aa15.08■□□□□ 0
SMARCA4-204ENST00000444061 FOXP2O15409 715 aa15.07■□□□□ 0
SMARCA4-204ENST00000444061 PSMA2P25787 234 aa15.07■□□□□ 0
SMARCA4-204ENST00000444061 ELOA2Q8IYF1 753 aaPredicted RBP15.07■□□□□ 0
SMARCA4-204ENST00000444061 MAF1Q9H063 256 aa15.07■□□□□ 0
SMARCA4-204ENST00000444061 KIF9Q9HAQ2 790 aa15.07■□□□□ 0
SMARCA4-204ENST00000444061 CNOT8Q9UFF9 292 aaKnown RBP15.07■□□□□ 0
SMARCA4-204ENST00000444061 CCDC85CA6NKD9 419 aa15.07■□□□□ 0
SMARCA4-204ENST00000444061 PSMD10O75832 226 aa15.07■□□□□ 0
SMARCA4-204ENST00000444061 SEZ6Q53EL9 994 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms