RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 KAT5Q92993 513 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 DCPSQ96C86 337 aaKnown RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 HES6Q96HZ4 224 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 FAM81BQ96LP2 452 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 FBXL18Q96ME1 805 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 PLEKHA4Q9H4M7 779 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 SLITRK6Q9H5Y7 841 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 KIAA1586Q9HCI6 787 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.25□□□□□ -0.611e-6■■■■■ 61.4
CPNE1-218ENST00000439806 PDLIM7Q9NR12 457 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 TOPORSQ9NS56 1045 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-218ENST00000439806 TMEM59LQ9UK28 342 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 NFU1Q9UMS0 254 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 COQ4Q9Y3A0 265 aa11.25□□□□□ -0.61
CPNE1-218ENST00000439806 FAM170AA1A519 330 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 ZNF233A6NK53 670 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 DDX3YO15523 660 aaKnown RBP11.24□□□□□ -0.61
CPNE1-218ENST00000439806 CYP26A1O43174 497 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 EXTL3O43909 919 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 DLATP10515 647 aaKnown RBP11.24□□□□□ -0.61
CPNE1-218ENST00000439806 SCP2P22307 547 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 CARSP49589 748 aaKnown RBP11.24□□□□□ -0.61
CPNE1-218ENST00000439806 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-218ENST00000439806 VGLL4Q14135 290 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 HLTFQ14527 1009 aaKnown RBP eCLIP11.24□□□□□ -0.615e-8■■□□□ 14.2
CPNE1-218ENST00000439806 CFAP58Q5T655 872 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 FAM160B1Q5W0V3 765 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 C11orf63Q6NUN7 778 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 LEKR1Q6ZMV7 388 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 ENOSF1Q7L5Y1 443 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 NOP9Q86U38 636 aaKnown RBP11.24□□□□□ -0.61
CPNE1-218ENST00000439806 NCAPG2Q86XI2 1143 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 PALB2Q86YC2 1186 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 FAM71AQ8IYT1 594 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 UBL4BQ8N7F7 174 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 EPS8L1Q8TE68 723 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.24□□□□□ -0.613e-13■■■■■ 108.9
CPNE1-218ENST00000439806 KREMEN1Q96MU8 473 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 FNBP1Q96RU3 617 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 NAP1L3Q99457 506 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-218ENST00000439806 MPHOSPH6Q99547 160 aaKnown RBP11.24□□□□□ -0.61
CPNE1-218ENST00000439806 FAM213AQ9BRX8 229 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 AP1M1Q9BXS5 423 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 ISCUQ9H1K1 167 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 FAM204AQ9H8W3 233 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 C1orf112Q9NSG2 853 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 RAB20Q9NX57 234 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 ARHGAP28Q9P2N2 729 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 TELO2Q9Y4R8 837 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 ADGRA3Q8IWK6 1321 aa11.24□□□□□ -0.61
CPNE1-218ENST00000439806 ZC3H4Q9UPT8 1303 aaKnown RBP11.24□□□□□ -0.61
CPNE1-218ENST00000439806 GOLGA6L10A0A0M3HER8 536 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 ESYT3A0FGR9 886 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 LRRIQ4A6NIV6 560 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 MIF4GDA9UHW6 222 aaKnown RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 ZC3H11AO75152 810 aaKnown RBP eCLIP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 ATG7O95352 703 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 ZBTB48P10074 688 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 GZMAP12544 262 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 KRT5P13647 590 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 CHRNB2P17787 502 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 RFC5P40937 340 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 NAMPTP43490 491 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 IREB2P48200 963 aaKnown RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 CNTN2Q02246 1040 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 PRPF4BQ13523 1007 aaKnown RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 CUL1Q13616 776 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 TCEAL1Q15170 157 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 PPP2R5EQ16537 467 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 WDR44Q5JSH3 913 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 TREML2Q5T2D2 321 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 SEL1L2Q5TEA6 688 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 SLFN12LQ6IEE8 588 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 LBX2Q6XYB7 198 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 EIF1ADQ8N9N8 165 aaKnown RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 TSEN2Q8NCE0 465 aaKnown RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 FAM76AQ8TAV0 307 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 HELQQ8TDG4 1101 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 TAS1R2Q8TE23 839 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 MORC4Q8TE76 937 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 TMEM143Q96AN5 459 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 ZNF653Q96CK0 615 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 POP1Q99575 1024 aaKnown RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 DDX47Q9H0S4 455 aaKnown RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 CARD9Q9H257 536 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 TAF1DQ9H5J8 278 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 NRBP2Q9NSY0 501 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 NOCTQ9UK39 431 aaKnown RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 TTC7AQ9ULT0 858 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 MAFBQ9Y5Q3 323 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-218ENST00000439806 SYNGAP1Q96PV0 1343 aa11.23□□□□□ -0.61
CPNE1-218ENST00000439806 GOLGA6CA6NDK9 693 aa11.22□□□□□ -0.61
CPNE1-218ENST00000439806 ZSCAN5CA6NGD5 496 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-218ENST00000439806 AGPSO00116 658 aa11.22□□□□□ -0.61
CPNE1-218ENST00000439806 LDHAP00338 332 aaKnown RBP11.22□□□□□ -0.61
CPNE1-218ENST00000439806 FGGP02679 453 aa11.22□□□□□ -0.61
CPNE1-218ENST00000439806 MMEP08473 750 aa11.22□□□□□ -0.61
CPNE1-218ENST00000439806 GOLGA6DP0CG33 693 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms