RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 NPTX2P47972 431 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 ME1P48163 572 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 NASPP49321 788 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 SLC12A3P55017 1021 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 POU5F1BQ06416 359 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 PRPF4BQ13523 1007 aaKnown RBP6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 PPP2R5AQ15172 486 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 TMEM119Q4V9L6 283 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 CLLU1OSQ5K130 101 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 DESI1Q6ICB0 168 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 RNF19BQ6ZMZ0 732 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 SV2BQ7L1I2 683 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 ZBTB33Q86T24 672 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 ZNF598Q86UK7 904 aaKnown RBP6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 GPBP1Q86WP2 473 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 CMTR2Q8IYT2 770 aaKnown RBP6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 DAW1Q8N136 415 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 KLHL23Q8NBE8 558 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 SMG8Q8ND04 991 aaKnown RBP6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 MAFAQ8NHW3 353 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 MICAL1Q8TDZ2 1067 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 RAD54LQ92698 747 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 KIFAP3Q92845 792 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 PGBD4Q96DM1 585 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 SPSB2Q99619 263 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 TRIM6Q9C030 488 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 GBP3Q9H0R5 595 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 C2orf40Q9H1Z8 148 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 FZD8Q9H461 694 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 CWH43Q9H720 699 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 RC3H2Q9HBD1 1191 aaKnown RBP6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 KMT5AQ9NQR1 393 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 PRDM6Q9NQX0 595 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 AGPAT5Q9NUQ2 364 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 PRMT7Q9NVM4 692 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 MIOSQ9NXC5 875 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 KLK14Q9P0G3 267 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 TBC1D7Q9P0N9 293 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 PARP2Q9UGN5 583 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 PCDHA7Q9UN72 937 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 IPPQ9Y573 584 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 MTCH2Q9Y6C9 303 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 RALGAPA2Q2PPJ7 1873 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 PLXNA4Q9HCM2 1894 aa6.36□□□□□ -1.39
HMGB3P24-201ENST00000433260 TDRD15B5MCY1 1934 aaKnown RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 A0A087X0B3 334 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 A0A1B0GUA9 196 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 H3BNC9 293 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 ACKR2O00590 384 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 CUTAO60888 179 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 PPP6R2O75170 966 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 OFD1O75665 1012 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 FAM13AO94988 1023 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 ADH1BP00325 375 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 EDN1P05305 212 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 ITGB1P05556 798 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 PRKCBP05771 671 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 SKIP12755 728 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 ATF7P17544 494 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 AXLP30530 894 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 STAT6P42226 847 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 AFF1P51825 1210 aaKnown RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 SMTNP53814 917 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 OSTNP61366 133 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 RNASELQ05823 741 aaKnown RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 MAPK7Q13164 816 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 DMP1Q13316 513 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 GIT2Q14161 759 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 MAPK6Q16659 721 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 SEZ6Q53EL9 994 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 NT5DC1Q5TFE4 455 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 EEF1DP3Q658K8 133 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 NOTUMQ6P988 496 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 SLC27A1Q6PCB7 646 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 SHC4Q6S5L8 630 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 AGMOQ6ZNB7 445 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 EP400NLQ6ZTU2 488 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 MRPL10Q7Z7H8 261 aaKnown RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 ZNF280BQ86YH2 543 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 THNSL1Q8IYQ7 743 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 KCTD17Q8N5Z5 321 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 SLC17A8Q8NDX2 589 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 LARP4BQ92615 738 aaKnown RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 RABGGTAQ92696 567 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 DHX58Q96C10 678 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 ZBTB45Q96K62 511 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 SPATA32Q96LK8 384 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 DRC1Q96MC2 740 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 FAM193BQ96PV7 902 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 REEP2Q9BRK0 252 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 TCHPQ9BT92 498 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 NFKBIZQ9BYH8 718 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 TMEM117Q9H0C3 514 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 CXCL16Q9H2A7 254 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 IGFLR1Q9H665 355 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 RSAD1Q9HA92 442 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 GDPD2Q9HCC8 539 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 AAASQ9NRG9 546 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 SNTG2Q9NY99 539 aa6.35□□□□□ -1.39
HMGB3P24-201ENST00000433260 RCOR1Q9UKL0 485 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms