RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	C15orf39	Q6ZRI6	1047 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	PRR23C	Q6ZRP0	262 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	GLYCTK	Q8IVS8	523 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	CMTR1	Q8N1G2	835 aa	Known RBP	9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	LRRC71	Q8N4P6	559 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	B3GALT6	Q96L58	329 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	BCO2	Q9BYV7	579 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	AZI2	Q9H6S1	392 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	JPH1	Q9HDC5	661 aa	Predicted RBP	9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	JADE2	Q9NQC1	790 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	MAP4K5	Q9Y4K4	846 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	TAF6L	Q9Y6J9	622 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	NBEA	Q8NFP9	2946 aa		9.85	□□□□□ -0.83
NIF3L1-206	ENST00000416651	IGKV6D-21	A0A0A0MT36	114 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	TEX28	O15482	410 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	TBC1D4	O60343	1298 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	ATG7	O95352	703 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	SHC2	P98077	582 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	RING1	Q06587	406 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	SF3A2	Q15428	464 aa	Known RBP	9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	PRR23B	Q6ZRT6	265 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	PLPPR4	Q7Z2D5	763 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	PALB2	Q86YC2	1186 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	METTL13	Q8N6R0	699 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	GIMAP8	Q8ND71	665 aa	Predicted RBP	9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	CMAS	Q8NFW8	434 aa	Predicted RBP	9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	EVI5L	Q96CN4	794 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	KXD1	Q9BQD3	176 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	MYL10	Q9BUA6	226 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	PLA2G2F	Q9BZM2	168 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	IL25	Q9H293	177 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	SMOC1	Q9H4F8	434 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	RNF41	Q9H4P4	317 aa	Predicted RBP	9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	PRMT8	Q9NR22	394 aa	Predicted RBP	9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	KCNH7	Q9NS40	1196 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	GMEB2	Q9UKD1	530 aa		9.84	□□□□□ -0.83
NIF3L1-206	ENST00000416651	DSP	P15924	2871 aa	Known RBP	9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651		A0A0U1RQF3	1178 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	GIPC1	O14908	333 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	OFD1	O75665	1012 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	POLG	P54098	1239 aa	Predicted RBP	9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	AK2	P54819	239 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	DRP2	Q13474	957 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	LRSAM1	Q6UWE0	723 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ABHD15	Q6UXT9	468 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	LINC01465	Q8N7H1	131 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SECISBP2L	Q93073	1101 aa	Known RBP	9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	CLDN23	Q96B33	292 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	NT5C3A	Q9H0P0	336 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	C2orf42	Q9NWW7	574 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	MARCH5	Q9NX47	278 aa		9.83	□□□□□ -0.84
NIF3L1-206	ENST00000416651	NOTCH4	Q99466	2003 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SRRM3	A6NNA2	597 aa	Predicted RBP	9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	HBP1	O60381	514 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RPLP2	P05387	115 aa	Known RBP	9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PC	P11498	1178 aa	Known RBP	9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ZSCAN20	P17040	1043 aa	Predicted RBP	9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RPL17	P18621	184 aa	Known RBP	9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	TROAP	Q12815	778 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	NONO	Q15233	471 aa	Known RBP eCLIP	9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SWSAP1	Q6NVH7	229 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	UNQ6494/PRO21346	Q6UXR6	183 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	TPRG1	Q6ZUI0	275 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PPFIBP1	Q86W92	1011 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ITFG1	Q8TB96	612 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PCDHA6	Q9UN73	950 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PCDHA8	Q9Y5H6	950 aa		9.82	□□□□□ -0.84
NIF3L1-206	ENST00000416651	WDFY3	Q8IZQ1	3526 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PIK3CD	O00329	1044 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	BACH1	O14867	736 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ADAMTS3	O15072	1205 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PLEKHA8P1	O95397	391 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RET	P07949	1114 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	EIF4B	P23588	611 aa	Known RBP	9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PHKA2	P46019	1235 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PDE1A	P54750	535 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	HNRNPU	Q00839	825 aa	Known RBP eCLIP	9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PTS	Q03393	145 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	GAS6	Q14393	721 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	CSRP2	Q16527	193 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	CCDC178	Q5BJE1	867 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	NOMO2	Q5JPE7	1267 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	ZNF385C	Q66K41	422 aa	Predicted RBP	9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	LAIR1	Q6GTX8	287 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PDXDC2P	Q6P474	469 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	AGMO	Q6ZNB7	445 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	GRASP	Q7Z6J2	395 aa	Predicted RBP	9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	RAB11FIP4	Q86YS3	637 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	SVOP	Q8N4V2	548 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	MXRA8	Q9BRK3	442 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	UBAC1	Q9BSL1	405 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	EMILIN2	Q9BXX0	1053 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PIDD1	Q9HB75	910 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	AGO4	Q9HCK5	861 aa	Known RBP	9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	HEBP1	Q9NRV9	189 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	NDRG2	Q9UN36	371 aa	Known RBP	9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	WASF3	Q9UPY6	502 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	AKT3	Q9Y243	479 aa		9.81	□□□□□ -0.84
NIF3L1-206	ENST00000416651	PRG3	Q9Y2Y8	225 aa	Predicted RBP	9.81	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms