RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ATMINO43313 823 aaPredicted RBP17.09■□□□□ 0.33
HOXD3-202ENST00000410016 PYGMP11217 842 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 HSPA6P17066 643 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 CHRNA3P32297 505 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 NPTX2P47972 431 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 PPP2R2AP63151 447 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 KRT39Q6A163 491 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 TTC27Q6P3X3 843 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 ANO5Q75V66 913 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 SPATS2Q86XZ4 545 aaKnown RBP17.09■□□□□ 0.33
HOXD3-202ENST00000410016 MAP4K3Q8IVH8 894 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 FBXO25Q8TCJ0 367 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 PDCD2LQ9BRP1 358 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 KIFC3Q9BVG8 833 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 ANKEF1Q9NU02 776 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 TMEM110-MUSTN1A8MSY1 372 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 GRIN3BO60391 1043 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 CYP1A2P05177 515 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 CYP11B1P15538 503 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 TMOD1P28289 359 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 LIG3P49916 1009 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 GPC3P51654 580 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 PLTPP55058 493 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 MFAP3P55082 362 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 XKR9Q5GH70 373 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 CPNE8Q86YQ8 564 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 SLC17A8Q8NDX2 589 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 MORC4Q8TE76 937 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 CCDC127Q96BQ5 260 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 SAAL1Q96ER3 474 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 FBXL18Q96ME1 805 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 NTPCRQ9BSD7 190 aaKnown RBP17.09■□□□□ 0.33
HOXD3-202ENST00000410016 WNT8AQ9H1J5 351 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 PABPC3Q9H361 631 aaKnown RBP17.09■□□□□ 0.33
HOXD3-202ENST00000410016 ZNRF3Q9ULT6 936 aa17.09■□□□□ 0.33
HOXD3-202ENST00000410016 WDR64B1ANS9 1081 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 E7EVH7 732 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 MEFVO15553 781 aaPredicted RBP17.08■□□□□ 0.33
HOXD3-202ENST00000410016 TRAPPC3O43617 180 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 NUDT17P0C025 328 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 MYCLP12524 364 aaPredicted RBP17.08■□□□□ 0.33
HOXD3-202ENST00000410016 KCNA3P22001 575 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 EIF3BP55884 814 aaKnown RBP17.08■□□□□ 0.33
HOXD3-202ENST00000410016 MAGOHP61326 146 aaKnown RBP17.08■□□□□ 0.33
HOXD3-202ENST00000410016 KRT71Q3SY84 523 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 TTC31Q49AM3 519 aaPredicted RBP17.08■□□□□ 0.33
HOXD3-202ENST00000410016 SLC39A4Q6P5W5 647 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 DDX1Q92499 740 aaKnown RBP17.08■□□□□ 0.33
HOXD3-202ENST00000410016 MAGOHBQ96A72 148 aaKnown RBP17.08■□□□□ 0.33
HOXD3-202ENST00000410016 TLCD1Q96CP7 247 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 RMDN3Q96TC7 470 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 TMEM8AQ9HCN3 771 aa17.08■□□□□ 0.33
HOXD3-202ENST00000410016 PPANQ9NQ55 473 aaKnown RBP17.08■□□□□ 0.33
HOXD3-202ENST00000410016 TCRBV7S2A1N4TA0A589 114 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 SHBGP04278 402 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 PAEPP09466 180 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 SFNP31947 248 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 JAK3P52333 1124 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 PPARDQ03181 441 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 CYP1B1Q16678 543 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 YTHDF3Q7Z739 585 aaKnown RBP17.08■□□□□ 0.32
HOXD3-202ENST00000410016 MICALL1Q8N3F8 863 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 BTBD6Q96KE9 485 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 MFSD14AQ96MC6 490 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 TEPSINQ96N21 525 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 PXMP2Q9NR77 195 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 EXOC7Q9UPT5 735 aa17.08■□□□□ 0.32
HOXD3-202ENST00000410016 GMNCA6NCL1 334 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 CCDC169A6NNP5 214 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 GGPS1O95749 300 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 RPL21P46778 160 aaKnown RBP17.07■□□□□ 0.32
HOXD3-202ENST00000410016 CXCL9Q07325 125 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 SIX1Q15475 284 aaPredicted RBP17.07■□□□□ 0.32
HOXD3-202ENST00000410016 ODF2Q5BJF6 829 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 ZNF564Q8TBZ8 553 aaPredicted RBP17.07■□□□□ 0.32
HOXD3-202ENST00000410016 TAS1R2Q8TE23 839 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 BSNDQ8WZ55 320 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 RNF25Q96BH1 459 aaPredicted RBP17.07■□□□□ 0.32
HOXD3-202ENST00000410016 NUP85Q9BW27 656 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 GGA2Q9UJY4 613 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 GTF3C4Q9UKN8 822 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 DENND3A2RUS2 1198 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 PODXLO00592 558 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 ERLIN2O94905 339 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 SMTNP53814 917 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 PMS2P54278 862 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 KRT76Q01546 638 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 CDR2Q01850 454 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 CCDC137Q6PK04 289 aaKnown RBP17.07■□□□□ 0.32
HOXD3-202ENST00000410016 C6orf89Q6UWU4 347 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 HVCN1Q96D96 273 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 TOPORSQ9NS56 1045 aaPredicted RBP17.07■□□□□ 0.32
HOXD3-202ENST00000410016 RAB20Q9NX57 234 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 RASAL2Q9UJF2 1139 aa17.07■□□□□ 0.32
HOXD3-202ENST00000410016 CAND2O75155 1236 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 SLC13A5Q86YT5 568 aaPredicted RBP17.06■□□□□ 0.32
HOXD3-202ENST00000410016 FBXL13Q8NEE6 735 aa17.06■□□□□ 0.32
HOXD3-202ENST00000410016 TMC2Q8TDI7 906 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms