RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 INO80BQ9C086 356 aaPredicted RBP14.37□□□□□ -0.11
COL6A2-204ENST00000409416 SIX2Q9NPC8 291 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 CEP83Q9Y592 693 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 GMNCA6NCL1 334 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 CLDN3O15551 220 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 CTNND1O60716 968 aaKnown RBP14.37□□□□□ -0.11
COL6A2-204ENST00000409416 RDXP35241 583 aaKnown RBP14.37□□□□□ -0.11
COL6A2-204ENST00000409416 TMEM62Q0P6H9 643 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 XXYLT1Q8NBI6 393 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 DEPTORQ8TB45 409 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 FAM151AQ8WW52 585 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 KAT6AQ92794 2004 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 LENG9Q96B70 501 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
COL6A2-204ENST00000409416 ERVK-5Q9HDB9 667 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 ANAPC7Q9UJX3 599 aa14.37□□□□□ -0.11
COL6A2-204ENST00000409416 SYNJ2BP-COX16A0A087WUM0 186 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 EIF4E1BA6NMX2 242 aaKnown RBP14.36□□□□□ -0.11
COL6A2-204ENST00000409416 CCDC188H7C350 402 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 MARSP56192 900 aaKnown RBP14.36□□□□□ -0.11
COL6A2-204ENST00000409416 PPP2R2AP63151 447 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 QPCTQ16769 361 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 SEL1L2Q5TEA6 688 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 DENND2CQ68D51 928 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 RFFLQ8WZ73 363 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 COX16Q9P0S2 106 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 CNOT8Q9UFF9 292 aaKnown RBP14.36□□□□□ -0.11
COL6A2-204ENST00000409416 PCDHB4Q9Y5E5 795 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 NOP56O00567 594 aaKnown RBP14.36□□□□□ -0.11
COL6A2-204ENST00000409416 SHBGP04278 402 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 CCDC172P0C7W6 258 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 GUCY2CP25092 1073 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 PIK3CAP42336 1068 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 PSEN1P49768 467 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 BFSP1Q12934 665 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 MTMR3Q13615 1198 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 PPP2R5AQ15172 486 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 ZNF720Q7Z2F6 126 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 SUPT20HQ8NEM7 779 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 RAB17Q9H0T7 212 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 GGA3Q9NZ52 723 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 ZNRF3Q9ULT6 936 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 MYH4Q9Y623 1939 aa14.36□□□□□ -0.11
COL6A2-204ENST00000409416 A6NNZ2 444 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 CAND2O75155 1236 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 ACTN3Q08043 901 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-204ENST00000409416 TKFCQ3LXA3 575 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 TUBB8Q3ZCM7 444 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 DALRD3Q5D0E6 543 aaKnown RBP14.35□□□□□ -0.11
COL6A2-204ENST00000409416 IFT74Q96LB3 600 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 MXRA8Q9BRK3 442 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 TARS2Q9BW92 718 aaKnown RBP14.35□□□□□ -0.11
COL6A2-204ENST00000409416 TRPC6Q9Y210 931 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 TMX2Q9Y320 296 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 NR3C2P08235 984 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 VCAM1P19320 739 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 CACNA2D3Q8IZS8 1091 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 NUP85Q9BW27 656 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 AZI2Q9H6S1 392 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 CD248Q9HCU0 757 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 PIM2Q9P1W9 311 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 SUCLA2Q9P2R7 463 aaPredicted RBP14.35□□□□□ -0.11
COL6A2-204ENST00000409416 DBR1Q9UK59 544 aaKnown RBP14.35□□□□□ -0.11
COL6A2-204ENST00000409416 FAM107AO95990 144 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 NOVP48745 357 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 STRN3Q13033 797 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 TMC3Q7Z5M5 1100 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 CCDC91Q7Z6B0 441 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 SESTD1Q86VW0 696 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 ACCSQ96QU6 501 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 PSMD1Q99460 953 aa14.35□□□□□ -0.11
COL6A2-204ENST00000409416 PRRC2BQ5JSZ5 2229 aaKnown RBP14.34□□□□□ -0.11
COL6A2-204ENST00000409416 TCRBV7S2A1N4TA0A589 114 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 RGS16O15492 202 aaPredicted RBP14.34□□□□□ -0.11
COL6A2-204ENST00000409416 THAP12O43422 761 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 GAP43P17677 238 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 ECHS1P30084 290 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 MAP2K2P36507 400 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 SNRNP35Q16560 246 aaKnown RBP14.34□□□□□ -0.11
COL6A2-204ENST00000409416 WDR44Q5JSH3 913 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 FBXO25Q8TCJ0 367 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 RAPGEF5Q92565 580 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 STK33Q9BYT3 514 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 FAM114A2Q9NRY5 505 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 APEX2Q9UBZ4 518 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 VAV3Q9UKW4 847 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 ALG6Q9Y672 507 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 FRMD3A2A2Y4 597 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 P4HBP07237 508 aaKnown RBP14.34□□□□□ -0.11
COL6A2-204ENST00000409416 COMTP21964 271 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 CNGA1P29973 690 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 DCUN1D2Q6PH85 259 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 ALG3Q92685 438 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 RASAL2Q9UJF2 1139 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 MAST2Q6P0Q8 1798 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 WEE2P0C1S8 567 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 BAG6P46379 1132 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 PDE6CP51160 858 aa14.34□□□□□ -0.11
COL6A2-204ENST00000409416 FSTL1Q12841 308 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms