RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 EFHBQ8N7U6 833 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 NAT16Q8N8M0 369 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 ZNF527Q8NB42 609 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 NUP43Q8NFH3 380 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 AFAP1L1Q8TED9 768 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 TGFBRAP1Q8WUH2 860 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 DCAF4Q8WV16 495 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 TMEM41AQ96HV5 264 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 MAGEH1Q9H213 219 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 MS4A5Q9H3V2 200 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 ATP8A2Q9NTI2 1148 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 NSMCE4AQ9NXX6 385 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.7□□□□□ -1.5
GABPB1-204ENST00000396464 CGGBP1Q9UFW8 167 aaPredicted RBP5.7□□□□□ -1.5
GABPB1-204ENST00000396464 ABCF2Q9UG63 623 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 PCDHB12Q9Y5F1 795 aa5.7□□□□□ -1.5
GABPB1-204ENST00000396464 A0A1W2PQJ5 194 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 TRIM64A6NGJ6 449 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 CAPN8A6NHC0 703 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 OTOL1A6NHN0 477 aaPredicted RBP5.69□□□□□ -1.5
GABPB1-204ENST00000396464 TRIM64BA6NI03 449 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 FADS2P1A8MWK0 482 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 CLGNO14967 610 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 P4HA2O15460 535 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 EFEMP2O95967 443 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 GYS1P13807 737 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 CDR1P51861 262 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 BPIFB3P59826 476 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 GALNT1Q10472 559 aaPredicted RBP5.69□□□□□ -1.5
GABPB1-204ENST00000396464 PSMD6Q15008 389 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 VMACQ2NL98 169 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 MFSD4BQ5TF39 518 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 PLBD1Q6P4A8 553 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 GGT6Q6P531 493 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 USP45Q70EL2 814 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 UBE2Q1Q7Z7E8 422 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 RPAINQ86UA6 219 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 FEZF2Q8TBJ5 459 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 UCMAQ8WVF2 138 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 PHKBQ93100 1093 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 SNX21Q969T3 373 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 VMP1Q96GC9 406 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 RCC1LQ96I51 464 aaKnown RBP5.69□□□□□ -1.5
GABPB1-204ENST00000396464 ASB2Q96Q27 587 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 SDF4Q9BRK5 362 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 KRTAP4-5Q9BYR2 181 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 CELF4Q9BZC1 486 aaKnown RBP5.69□□□□□ -1.5
GABPB1-204ENST00000396464 DBNDD1Q9H9R9 158 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 STARD7Q9NQZ5 370 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 ZNF112Q9UJU3 913 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 PADI4Q9UM07 663 aa5.69□□□□□ -1.5
GABPB1-204ENST00000396464 A0A1W2PQ45 241 aaPredicted RBP5.68□□□□□ -1.5
GABPB1-204ENST00000396464 A0A1W2PQY0 241 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 B4DLN1 442 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 SHOXO15266 292 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 SKAP2O75563 359 aaPredicted RBP5.68□□□□□ -1.5
GABPB1-204ENST00000396464 ALDH2P05091 517 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 CELA3BP08861 270 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 IDEP14735 1019 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 AGXTP21549 392 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 HTR1BP28222 390 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 NPTX2P47972 431 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 TUBP50607 506 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 AGFG1P52594 562 aaKnown RBP5.68□□□□□ -1.5
GABPB1-204ENST00000396464 COPAP53621 1224 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 PMS2P11Q13670 270 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 SPARCL1Q14515 664 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 POLD3Q15054 466 aaPredicted RBP5.68□□□□□ -1.5
GABPB1-204ENST00000396464 PDCD1Q15116 288 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 UAP1L1Q3KQV9 507 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 ANO6Q4KMQ2 910 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 HECTD3Q5T447 861 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 DENND5AQ6IQ26 1287 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 TTLL7Q6ZT98 887 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 PRRT2Q7Z6L0 340 aaPredicted RBP5.68□□□□□ -1.5
GABPB1-204ENST00000396464 LRRTM4Q86VH4 590 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 LCA5Q86VQ0 697 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 LDHDQ86WU2 507 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 LIX1LQ8IVB5 337 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 SYTL1Q8IYJ3 562 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 ARHGEF39Q8N4T4 335 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 C7orf31Q8N865 590 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 ANKRD52Q8NB46 1076 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 RADILQ96JH8 1075 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 PWWP2AQ96N64 755 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 SPAG5Q96R06 1193 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 TREX2Q9BQ50 279 aaPredicted RBP5.68□□□□□ -1.5
GABPB1-204ENST00000396464 DSCC1Q9BVC3 393 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 BTBD1Q9H0C5 482 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 XYLT2Q9H1B5 865 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 NKX2-4Q9H2Z4 354 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 GFOD1Q9NXC2 390 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 AASSQ9UDR5 926 aa5.68□□□□□ -1.5
GABPB1-204ENST00000396464 GOLGA6L6A8MZA4 724 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 MASP2O00187 686 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 CHL1O00533 1208 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 FFAR2O15552 330 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 IRAK2O43187 625 aa5.67□□□□□ -1.5
GABPB1-204ENST00000396464 DKC1O60832 514 aaKnown RBP eCLIP5.67□□□□□ -1.5
GABPB1-204ENST00000396464 SCG5P05408 212 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms