RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 EDN1P05305 212 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 SRGAP2BP0DMP2 458 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 LTBRP36941 435 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 OR1G1P47890 313 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 SMTNP53814 917 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
UPK3A-202ENST00000396082 DLX2Q07687 328 aaPredicted RBP19.25■□□□□ 0.67
UPK3A-202ENST00000396082 ADAM15Q13444 863 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 DCAF4L1Q3SXM0 396 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 SPECC1Q5M775 1068 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 FOXD4L5Q5VV16 416 aaPredicted RBP19.25■□□□□ 0.67
UPK3A-202ENST00000396082 EEF1DP3Q658K8 133 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 GPBP1Q86WP2 473 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 SPRYD3Q8NCJ5 442 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 FOXD4L4Q8WXT5 416 aaPredicted RBP19.25■□□□□ 0.67
UPK3A-202ENST00000396082 CCSER1Q9C0I3 900 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 TMEM134Q9H6X4 195 aa19.25■□□□□ 0.67
UPK3A-202ENST00000396082 FBXO2Q9UK22 296 aaPredicted RBP19.25■□□□□ 0.67
UPK3A-202ENST00000396082 PRG3Q9Y2Y8 225 aaPredicted RBP19.25■□□□□ 0.67
UPK3A-202ENST00000396082 ZMYM2Q9UBW7 1377 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 NPHP3-ACAD11A0A0J9YXS1 232 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 TNFRSF10AO00220 468 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 INPPL1O15357 1258 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 PDIA4P13667 645 aaKnown RBP19.24■□□□□ 0.67
UPK3A-202ENST00000396082 PLS3P13797 630 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 IL9P15248 144 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 GRIK3Q13003 919 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 STRN3Q13033 797 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 MCM6Q14566 821 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 STK38Q15208 465 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 DUSP6Q16828 381 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 NT5DC1Q5TFE4 455 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 DDX53Q86TM3 631 aaKnown RBP19.24■□□□□ 0.67
UPK3A-202ENST00000396082 RAD54LQ92698 747 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 EPSTI1Q96J88 318 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 ZNF396Q96N95 335 aaPredicted RBP19.24■□□□□ 0.67
UPK3A-202ENST00000396082 MRPL4Q9BYD3 311 aaKnown RBP19.24■□□□□ 0.67
UPK3A-202ENST00000396082 SNTG2Q9NY99 539 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 LARSQ9P2J5 1176 aaKnown RBP19.24■□□□□ 0.67
UPK3A-202ENST00000396082 ARHGAP28Q9P2N2 729 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 CD207Q9UJ71 328 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 GDAQ9Y2T3 454 aa19.24■□□□□ 0.67
UPK3A-202ENST00000396082 SRPRBQ9Y5M8 271 aaKnown RBP19.24■□□□□ 0.67
UPK3A-202ENST00000396082 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.23■□□□□ 0.67
UPK3A-202ENST00000396082 GRXCR2A6NFK2 248 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 HIDE1A8MVS5 230 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 NRP1O14786 923 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 RECQL4O94761 1208 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 FAM13AO94988 1023 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 ZNF568Q3ZCX4 644 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 COLGALT2Q8IYK4 626 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 KRI1Q8N9T8 703 aaKnown RBP19.23■□□□□ 0.67
UPK3A-202ENST00000396082 BCL7CQ8WUZ0 217 aaPredicted RBP19.23■□□□□ 0.67
UPK3A-202ENST00000396082 SPIRE2Q8WWL2 714 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 LARP4BQ92615 738 aaKnown RBP19.23■□□□□ 0.67
UPK3A-202ENST00000396082 CLIC6Q96NY7 704 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 ZBP1Q9H171 429 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 BLOC1S4Q9NUP1 217 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 MIOSQ9NXC5 875 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 STK39Q9UEW8 545 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 ODF2LQ9ULJ1 636 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 BARX2Q9UMQ3 279 aaPredicted RBP19.23■□□□□ 0.67
UPK3A-202ENST00000396082 TNFSF13BQ9Y275 285 aa19.23■□□□□ 0.67
UPK3A-202ENST00000396082 H0YCG3 227 aa19.22■□□□□ 0.67
UPK3A-202ENST00000396082 TBCAO75347 108 aaKnown RBP19.22■□□□□ 0.67
UPK3A-202ENST00000396082 CXCL14O95715 111 aa19.22■□□□□ 0.67
UPK3A-202ENST00000396082 GIT2Q14161 759 aa19.22■□□□□ 0.67
UPK3A-202ENST00000396082 SLC39A14Q15043 492 aa19.22■□□□□ 0.67
UPK3A-202ENST00000396082 LLGL2Q6P1M3 1020 aa19.22■□□□□ 0.67
UPK3A-202ENST00000396082 MRPL43Q8N983 215 aaKnown RBP19.22■□□□□ 0.67
UPK3A-202ENST00000396082 REEP2Q9BRK0 252 aa19.22■□□□□ 0.67
UPK3A-202ENST00000396082 TCHPQ9BT92 498 aa19.22■□□□□ 0.67
UPK3A-202ENST00000396082 TARS2Q9BW92 718 aaKnown RBP19.22■□□□□ 0.67
UPK3A-202ENST00000396082 ZHX3Q9H4I2 956 aa19.22■□□□□ 0.67
UPK3A-202ENST00000396082 DAXXQ9UER7 740 aaPredicted RBP19.22■□□□□ 0.67
UPK3A-202ENST00000396082 A0A0C4DFX4 3053 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 C2orf71A6NGG8 1288 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 GLP2RO95838 553 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 CTSAP10619 480 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 DSC1Q08554 894 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 SMAD4Q13485 552 aaKnown RBP19.21■□□□□ 0.67
UPK3A-202ENST00000396082 ARSHQ5FYA8 562 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 RRAGBQ5VZM2 374 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 USP49Q70CQ1 688 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 TAS1R3Q7RTX0 852 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 GSTCDQ8NEC7 633 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 LRRC15Q8TF66 581 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 AUTS2Q8WXX7 1259 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 ACO2Q99798 780 aaKnown RBP19.21■□□□□ 0.67
UPK3A-202ENST00000396082 COLEC11Q9BWP8 271 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 STK17AQ9UEE5 414 aa19.21■□□□□ 0.67
UPK3A-202ENST00000396082 ZSCAN22P10073 491 aaPredicted RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 HARSP12081 509 aaKnown RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 NASPP49321 788 aaPredicted RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 YARSP54577 528 aaKnown RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 RBM10P98175 930 aaKnown RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 FOXD4L6Q3SYB3 417 aaPredicted RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 FOXD4L3Q6VB84 417 aaPredicted RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 ZBTB33Q86T24 672 aa19.2■□□□□ 0.66
UPK3A-202ENST00000396082 MYCT1Q8N699 235 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms