RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 CCDC13Q8IYE1 715 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 RBM46Q8TBY0 533 aaKnown RBP7.02□□□□□ -1.29
BDNF-203ENST00000395978 ZIM3Q96PE6 472 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 PDCD2LQ9BRP1 358 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 KIAA1683Q9H0B3 1180 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 RANBP17Q9H2T7 1088 aaKnown RBP7.02□□□□□ -1.29
BDNF-203ENST00000395978 DUOX1Q9NRD9 1551 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 LRRD1A4D1F6 860 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 KRT1P04264 644 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 MYBL1P10243 752 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 OSBPP22059 807 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 CCNA1P78396 465 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 KIAA1755Q5JYT7 1200 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 LMBRD2Q68DH5 695 aaPredicted RBP7.02□□□□□ -1.29
BDNF-203ENST00000395978 NIPA1Q7RTP0 329 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 ERICH1Q86X53 443 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 DDX42Q86XP3 938 aaKnown RBP eCLIP7.02□□□□□ -1.29
BDNF-203ENST00000395978 CEP57Q86XR8 500 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 PASD1Q8IV76 773 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 SH2D3CQ8N5H7 860 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 HDAC7Q8WUI4 952 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 NLRP4Q96MN2 994 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 HEMGNQ9BXL5 484 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 TTYH3Q9C0H2 523 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 THAP2Q9H0W7 228 aa7.02□□□□□ -1.29
BDNF-203ENST00000395978 DBR1Q9UK59 544 aaKnown RBP7.02□□□□□ -1.29
BDNF-203ENST00000395978 KLRG2A4D1S0 409 aaPredicted RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 ANKRD65E5RJM6 399 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 WNT10BO00744 389 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 MED7O43513 233 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 MAPTP10636 758 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 PRKCIP41743 596 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 STAT5BP51692 787 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 YARSP54577 528 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 MARSP56192 900 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 MAGOHP61326 146 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 PRKCEQ02156 737 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ZNF394Q53GI3 561 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 PRAMEF18Q5VWM3 479 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 CYP4F22Q6NT55 531 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 CBWD2Q8IUF1 395 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 PALM2Q8IXS6 379 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 PROCA1Q8NCQ7 364 aaPredicted RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 SLC30A5Q8TAD4 765 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 CCHCR1Q8TD31 782 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ACTRT1Q8TDG2 376 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 TMEM143Q96AN5 459 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 AGO4Q9HCK5 861 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 HESX1Q9UBX0 185 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 PCDHB2Q9Y5E7 798 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 PCDHGC5Q9Y5F6 944 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 N4BP2Q86UW6 1770 aaPredicted RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 DDX3XO00571 662 aaKnown RBP eCLIP7.01□□□□□ -1.29
BDNF-203ENST00000395978 GLI1P08151 1106 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 COMTP21964 271 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 GNA15P30679 374 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 NPTX2P47972 431 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ACOT2P49753 483 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 MMP14P50281 582 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 IRAK1P51617 712 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 GTF2A1P52655 376 aaPredicted RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 EFNA5P52803 228 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 BACE1P56817 501 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ANGEL2Q5VTE6 544 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 SCYL2Q6P3W7 929 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 LRIG3Q6UXM1 1119 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 SCYL3Q8IZE3 742 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 CCDC197Q8NCU1 140 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 CASKIN2Q8WXE0 1202 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 TRIM51Q9BSJ1 452 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 WDR18Q9BV38 432 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 KIFC3Q9BVG8 833 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 TRIM7Q9C029 511 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 GANQ9H2C0 597 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 RPF1Q9H9Y2 349 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 ADAMTS7Q9UKP4 1686 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 IGSF9BQ9UPX0 1349 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 SGK1O00141 431 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ACSL3O95573 720 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 GZMAP12544 262 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 VCAM1P19320 739 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 PHBP35232 272 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 PPP2R2AP63151 447 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ZCWPW2Q504Y3 356 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ZNF667Q5HYK9 610 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 CAPN12Q6ZSI9 719 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 SH3BP5LQ7L8J4 393 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 DNAAF5Q86Y56 855 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 MAP7D3Q8IWC1 876 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 RHOT1Q8IXI2 618 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 ERP44Q9BS26 406 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 MRPL4Q9BYD3 311 aaKnown RBP7.01□□□□□ -1.29
BDNF-203ENST00000395978 FGFBP2Q9BYJ0 223 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 DNAJC18Q9H819 358 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 PRM3Q9NNZ6 103 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 HACL1Q9UJ83 578 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 GTF3C4Q9UKN8 822 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 AKT3Q9Y243 479 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 FAM169AQ9Y6X4 670 aa7.01□□□□□ -1.29
BDNF-203ENST00000395978 SNED1Q8TER0 1413 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms