RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 OSBPL1AQ9BXW6 950 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 CNOT10Q9H9A5 744 aaKnown RBP14.15□□□□□ -0.14
NFKB1-202ENST00000394820 ERVK-5Q9HDB9 667 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 SAYSD1Q9NPB0 183 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 SUGT1Q9Y2Z0 365 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 SLC16A4O15374 487 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 CD19P15391 556 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 CPA2P48052 419 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 SKOR1P84550 965 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 KRT17Q04695 432 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 PPP2R5DQ14738 602 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 XKR9Q5GH70 373 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 SIAH1Q8IUQ4 282 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 ERP27Q96DN0 273 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 TRAPPC3O43617 180 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 MXI1P50539 228 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 GIT2Q14161 759 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 WDR78Q5VTH9 848 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 ANKRD20A3Q5VUR7 823 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 PRAMEF18Q5VWM3 479 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.14□□□□□ -0.15
NFKB1-202ENST00000394820 CPA5Q8WXQ8 436 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 MAGED2Q9UNF1 606 aaPredicted RBP14.14□□□□□ -0.15
NFKB1-202ENST00000394820 NOL4O94818 638 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 KITP10721 976 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 PRLRP16471 622 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 BYSLQ13895 437 aaKnown RBP14.14□□□□□ -0.15
NFKB1-202ENST00000394820 CAPRIN2Q6IMN6 1127 aaKnown RBP14.14□□□□□ -0.15
NFKB1-202ENST00000394820 MIER3Q7Z3K6 550 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 CNKSR1Q969H4 720 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 AGBL1Q96MI9 1066 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 C11orf70Q9BRQ4 267 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 CCPG1Q9ULG6 757 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 GBP1P32455 592 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 HSPA9P38646 679 aaKnown RBP14.14□□□□□ -0.15
NFKB1-202ENST00000394820 NT5C2P49902 561 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 FIGNQ5HY92 759 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 LMNTD2Q8IXW0 634 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 JDP2Q8WYK2 163 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 POMGNT1Q8WZA1 660 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 RILPQ96NA2 401 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 GLT8D2Q9H1C3 349 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 GJA3Q9Y6H8 435 aa14.14□□□□□ -0.15
NFKB1-202ENST00000394820 CFAP69A5D8W1 941 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 EIF2AK2P19525 551 aaKnown RBP14.13□□□□□ -0.15
NFKB1-202ENST00000394820 LLGL2Q6P1M3 1020 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 ZNF564Q8TBZ8 553 aaPredicted RBP14.13□□□□□ -0.15
NFKB1-202ENST00000394820 NAP1L4Q99733 375 aaKnown RBP14.13□□□□□ -0.15
NFKB1-202ENST00000394820 HAO1Q9UJM8 370 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 FZD1Q9UP38 647 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.13□□□□□ -0.15
NFKB1-202ENST00000394820 SCN7AQ01118 1682 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 ARP10275 920 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 EIF3BP55884 814 aaKnown RBP14.13□□□□□ -0.15
NFKB1-202ENST00000394820 RBM46Q8TBY0 533 aaKnown RBP14.13□□□□□ -0.15
NFKB1-202ENST00000394820 ZNF341Q9BYN7 854 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 G3BP2Q9UN86 482 aaKnown RBP14.13□□□□□ -0.15
NFKB1-202ENST00000394820 SGK1O00141 431 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 FMO5P49326 533 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 ADCY2Q08462 1091 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 CFAP61Q8NHU2 1237 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 DHX38Q92620 1227 aaKnown RBP14.13□□□□□ -0.15
NFKB1-202ENST00000394820 PRM3Q9NNZ6 103 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 ANKFY1Q9P2R3 1169 aa14.13□□□□□ -0.15
NFKB1-202ENST00000394820 TCRBV7S2A1N4TA0A589 114 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 SHOX2O60902 331 aaPredicted RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 ATP6V1G2O95670 118 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 FOSP01100 380 aaPredicted RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 RPL21P46778 160 aaKnown RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 BBS9Q3SYG4 887 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 AGAP11Q8TF27 550 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 NUDCD1Q96RS6 583 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 SLITRK6Q9H5Y7 841 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 TYW1Q9NV66 732 aaKnown RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 LARSQ9P2J5 1176 aaKnown RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 ATP2A1O14983 1001 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 FSBPO95073 299 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 GH1P01241 217 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 CLK2P49760 499 aaKnown RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 GPC5P78333 572 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 AP3B2Q13367 1082 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 SPATA21Q7Z572 469 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 APBB1IPQ7Z5R6 666 aaPredicted RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 ZC3H18Q86VM9 953 aaKnown RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 ALG3Q92685 438 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 PABPC3Q9H361 631 aaKnown RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 RAVER2Q9HCJ3 691 aaKnown RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 ATF5Q9Y2D1 282 aaPredicted RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 ARHGAP42A6NI28 874 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 GJB6O95452 261 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 SPATA31C1P0DKV0 1188 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 POLD1P28340 1107 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 RWDD2BP57060 319 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 RASIP1Q5U651 963 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 EPM2AIP1Q7L775 607 aaPredicted RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 TTC17Q96AE7 1141 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 GPRC5CQ9NQ84 441 aa14.12□□□□□ -0.15
NFKB1-202ENST00000394820 AJAP1Q9UKB5 411 aaPredicted RBP14.12□□□□□ -0.15
NFKB1-202ENST00000394820 USP15Q9Y4E8 981 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms