RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 TMED1Q13445 227 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 SPARCL1Q14515 664 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.31□□□□□ -1.56
LTN1-202ENST00000389194 CEP55Q53EZ4 464 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 DALRD3Q5D0E6 543 aaKnown RBP5.31□□□□□ -1.56
LTN1-202ENST00000389194 ANGPTL8Q6UXH0 198 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 TRIM67Q6ZTA4 783 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 SAMD7Q7Z3H4 446 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 BBOF1Q8ND07 529 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 DACT3Q96B18 629 aaPredicted RBP5.31□□□□□ -1.56
LTN1-202ENST00000389194 MAP3K14Q99558 947 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 CD248Q9HCU0 757 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 HACD3Q9P035 362 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 MAD2L2Q9UI95 211 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 AGO2Q9UKV8 859 aaKnown RBP5.31□□□□□ -1.56
LTN1-202ENST00000389194 CDHR2Q9BYE9 1310 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 PVALEFA0A1B0GWK0 134 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 MAPK13O15264 365 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 COMTP21964 271 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 SLC18A3Q16572 532 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 KIF19Q2TAC6 998 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 NAALADL2Q58DX5 795 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 KCNT1Q5JUK3 1230 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 RNF217Q8TC41 542 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 BHMTQ93088 406 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 LRRC37BQ96QE4 947 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 RUSC1Q9BVN2 902 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 THAP2Q9H0W7 228 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 SPC25Q9HBM1 224 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 ZNF302Q9NR11 478 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 OLA1Q9NTK5 396 aaKnown RBP5.31□□□□□ -1.56
LTN1-202ENST00000389194 PRR12Q9ULL5 1215 aa5.31□□□□□ -1.56
LTN1-202ENST00000389194 MYO9BQ13459 2157 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 URB1O60287 2271 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 GNGT2O14610 69 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PIAS1O75925 651 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 ENO1P06733 434 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 CSF1RP07333 972 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 CTSHP09668 335 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PSMC6P62333 389 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 LMNB2Q03252 620 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SRLQ86TD4 932 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.3□□□□□ -1.56
LTN1-202ENST00000389194 ZNF473Q8WTR7 871 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 FGFR1OP2Q9NVK5 253 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SYNGAP1Q96PV0 1343 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 LPXNO60711 386 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 DNAJC6O75061 913 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 RXRBP28702 533 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PTPRMP28827 1452 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 GARSP41250 739 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 FMO5P49326 533 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SLC29A2Q14542 456 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 C1orf146Q5VVC0 180 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 ZNF34Q8IZ26 560 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 DCAF4Q8WV16 495 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 RAPGEF5Q92565 580 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 C18orf8Q96DM3 657 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SPATA33Q96N06 139 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 TRAIPQ9BWF2 469 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SPZ1Q9BXG8 430 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 UNKQ9C0B0 810 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 USP42Q9H9J4 1324 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 HPS4Q9NQG7 708 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PIH1D1Q9NWS0 290 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 FAF1Q9UNN5 650 aaPredicted RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 PNPLA7Q6ZV29 1317 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 CCDC188H7C350 402 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 ORC4O43929 436 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PFDN1O60925 122 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 DGKIO75912 1065 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 SEC24DO94855 1032 aaPredicted RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 P4HBP07237 508 aaKnown RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 PMLP29590 882 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 CYP2C19P33261 490 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 RAD23BP54727 409 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 ICE2Q659A1 982 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 KRT39Q6A163 491 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PPP4R3CPQ6ZMV5 832 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 CEP70Q8NHQ1 597 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 NUDT12Q9BQG2 462 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 FUCA2Q9BTY2 467 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 KCNQ5Q9NR82 932 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 TOPORSQ9NS56 1045 aaPredicted RBP5.3□□□□□ -1.56
LTN1-202ENST00000389194 RNF14Q9UBS8 474 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 CHMP2BQ9UQN3 213 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 ANGPTL3Q9Y5C1 460 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 ENO4A6NNW6 628 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 KCNN4O15554 427 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 MED24O75448 989 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 KRT10P13645 584 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 MAP7Q14244 749 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 STXBP2Q15833 593 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 GLRA4Q5JXX5 417 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 LONP2Q86WA8 852 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 PROM2Q8N271 834 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 TMEM35BQ8NCS4 154 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 RFFLQ8WZ73 363 aa5.3□□□□□ -1.56
LTN1-202ENST00000389194 DHX38Q92620 1227 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms