RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.77□□□□□ -0.52
BEST1-201ENST00000378043 ASNSP08243 561 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 NUDT17P0C025 328 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 RASA3Q14644 834 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 SNRNP35Q16560 246 aaKnown RBP11.77□□□□□ -0.53
BEST1-201ENST00000378043 FBXW10Q5XX13 1052 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 PLA2G4FQ68DD2 849 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 CHADLQ6NUI6 762 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 UBL4BQ8N7F7 174 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 PRPF38AQ8NAV1 312 aaKnown RBP11.77□□□□□ -0.53
BEST1-201ENST00000378043 RAPGEF5Q92565 580 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 SAAL1Q96ER3 474 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 HOMER2Q9NSB8 354 aa11.77□□□□□ -0.53
BEST1-201ENST00000378043 ALAS1P13196 640 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 EIF2AK2P19525 551 aaKnown RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 CHRNA3P32297 505 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 PMS2P54278 862 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 TNIP1Q15025 636 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 SIX1Q15475 284 aaPredicted RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 FAM83AQ86UY5 434 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 C4orf19Q8IY42 314 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 OTUD6BQ8N6M0 293 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 TMEM161BQ8NDZ6 487 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 PARD3BQ8TEW8 1205 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 CCDC127Q96BQ5 260 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 PSMD1Q99460 953 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 EFCC1Q9HA90 598 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 RAVER2Q9HCJ3 691 aaKnown RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 DDX20Q9UHI6 824 aaKnown RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 GGA2Q9UJY4 613 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 GRIN3BO60391 1043 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 CYP1A2P05177 515 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 CNGA1P29973 690 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 EIF3BP55884 814 aaKnown RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 RPS6P62753 249 aaKnown RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 CLUL1Q15846 466 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 CCDC137Q6PK04 289 aaKnown RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 MDM1Q8TC05 714 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 DDX1Q92499 740 aaKnown RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 SEMA4AQ9H3S1 761 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 ZNF277Q9NRM2 450 aaPredicted RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 TOPORSQ9NS56 1045 aaPredicted RBP11.76□□□□□ -0.53
BEST1-201ENST00000378043 TBX20Q9UMR3 447 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 COQ4Q9Y3A0 265 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 KIAA1217Q5T5P2 1943 aa11.76□□□□□ -0.53
BEST1-201ENST00000378043 FSBPO95073 299 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 CYP11B1P15538 503 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 HSPA6P17066 643 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 IFFO1Q0D2I5 559 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 IFT88Q13099 833 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 SLC29A2Q14542 456 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 PGM5Q15124 567 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 CYP1B1Q16678 543 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 NBPF9Q3BBW0 867 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 SLC39A4Q6P5W5 647 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 KCNV1Q6PIU1 500 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 ANO5Q75V66 913 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 TAS1R2Q8TE23 839 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 NUP85Q9BW27 656 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 WNT8AQ9H1J5 351 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 TBC1D22BQ9NU19 505 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 PNMA2Q9UL42 364 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 RGPD3A6NKT7 1758 aaPredicted RBP11.75□□□□□ -0.53
BEST1-201ENST00000378043 RGPD4Q7Z3J3 1758 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 RARAP10276 462 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 NPTX2P47972 431 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 SOX10P56693 466 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 SNRPFP62306 86 aaKnown RBP11.75□□□□□ -0.53
BEST1-201ENST00000378043 BYSLQ13895 437 aaKnown RBP11.75□□□□□ -0.53
BEST1-201ENST00000378043 FAM102BQ5T8I3 360 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 MCF2L2Q86YR7 1114 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 LARGE2Q8N3Y3 721 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 ZNF564Q8TBZ8 553 aaPredicted RBP11.75□□□□□ -0.53
BEST1-201ENST00000378043 BSNDQ8WZ55 320 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 DHX38Q92620 1227 aaKnown RBP11.75□□□□□ -0.53
BEST1-201ENST00000378043 ADAM7Q9H2U9 754 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 CAPN7Q9Y6W3 813 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 DOCK5Q9H7D0 1870 aa11.75□□□□□ -0.53
BEST1-201ENST00000378043 C5orf60A6NFR6 353 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 TP73O15350 636 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 KIAA0754O94854 1291 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 CALCAP01258 141 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 KCNJ1P48048 391 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 GPC3P51654 580 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 PSMC5P62195 406 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 SPRED3Q2MJR0 410 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 XKR9Q5GH70 373 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 KRT39Q6A163 491 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 MICALCLQ6ZW33 695 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 SLC13A5Q86YT5 568 aaPredicted RBP11.74□□□□□ -0.53
BEST1-201ENST00000378043 MAP4K3Q8IVH8 894 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 C3orf20Q8ND61 904 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 ZBED3Q96IU2 234 aaPredicted RBP11.74□□□□□ -0.53
BEST1-201ENST00000378043 FAM84AQ96KN4 292 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 GTF3C4Q9UKN8 822 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 CCDC169A6NNP5 214 aa11.74□□□□□ -0.53
BEST1-201ENST00000378043 PODXLO00592 558 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms