RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 PTENP60484 403 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 MTMR3Q13615 1198 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 DAB2IPQ5VWQ8 1189 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 IRGCQ6NXR0 463 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 TRAPPC9Q96Q05 1148 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 RAB34Q9BZG1 259 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 MAF1Q9H063 256 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 TLE6Q9H808 572 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 ATXN10Q9UBB4 475 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 NAGPAQ9UK23 515 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 PCDHA6Q9UN73 950 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 PCDHA8Q9Y5H6 950 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 MAGEA13PA6NCF6 341 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 RGS16O15492 202 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 SLC9A1P19634 815 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 EIF4BP23588 611 aaKnown RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 RPL13P26373 211 aaKnown RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 ABCD1P33897 745 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 BTDP43251 543 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 EMP3P54852 163 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 ATP11AP98196 1134 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 GRB10Q13322 594 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 BTG3Q14201 252 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 SNX30Q5VWJ9 437 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 NSMFQ6X4W1 530 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 LNX1Q8TBB1 728 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 ZNF668Q96K58 619 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 CCSER1Q9C0I3 900 aa9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 DMAP1Q9NPF5 467 aaPredicted RBP9.37□□□□□ -0.91
SMARCA1-203ENST00000371123 DDX3XO00571 662 aaKnown RBP eCLIP9.36□□□□□ -0.917e-23■□□□□ 10.3
SMARCA1-203ENST00000371123 HIP1RO75146 1068 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 AGTP01019 485 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 GCAP28676 217 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 COBLL1Q53SF7 1204 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 SFMBT2Q5VUG0 894 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 JAMLQ86YT9 394 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 ZC3H12CQ9C0D7 883 aaKnown RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 CYLDQ9NQC7 956 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 CEP72Q9P209 647 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 KCPQ6ZWJ8 1503 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 BPTFQ12830 3046 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 GFPT2O94808 682 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 PLCG2P16885 1265 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 KCNA3P22001 575 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 MTFR1Q15390 333 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 SEPT7Q16181 437 aaKnown RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 SYCP2LQ5T4T6 812 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 ARL6IP4Q66PJ3 421 aaKnown RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 C4orf50Q6ZRC1 276 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 APBB1IPQ7Z5R6 666 aaPredicted RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 MYCT1Q8N699 235 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 PRELID2Q8N945 189 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 ARHGEF26Q96DR7 871 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 TMEM109Q9BVC6 243 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 SIX2Q9NPC8 291 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 ARHGEF4Q9NR80 690 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 EURLQ9NYK6 297 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 TAS2R14Q9NYV8 317 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 PCDHA12Q9UN75 941 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 ZNFX1Q9P2E3 1918 aaKnown RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 LAMB1P07942 1786 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 COL1A1P02452 1464 aaPredicted RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 NVLO15381 856 aaKnown RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 CYTH3O43739 400 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 PENKP01210 267 aaPredicted RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 LYNP07948 512 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 OR52Z1P0C646 297 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 ALAS1P13196 640 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 VCAM1P19320 739 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 SKIV2L2P42285 1042 aaKnown RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 SIX1Q15475 284 aaPredicted RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 SLC9C1Q4G0N8 1177 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 C2CD6Q53TS8 623 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 ZNF362Q5T0B9 420 aaPredicted RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 MFSD5Q6N075 450 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 ZNF449Q6P9G9 518 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 PEX26Q7Z412 305 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 NEK9Q8TD19 979 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 KRT35Q92764 455 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 OPTNQ96CV9 577 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 PHF12Q96QT6 1004 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 DBNDD1Q9H9R9 158 aa9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 CCNL1Q9UK58 526 aaPredicted RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 BZW2Q9Y6E2 419 aaKnown RBP9.36□□□□□ -0.91
SMARCA1-203ENST00000371123 PCNTO95613 3336 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 SPDYE16A6NNV3 312 aaPredicted RBP9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 AMPD1P23109 780 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 PPATQ06203 517 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 KPNB1Q14974 876 aaKnown RBP9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 ASIC2Q16515 512 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 FAM114A1Q8IWE2 563 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 IKZF4Q9H2S9 585 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 SLITRK6Q9H5Y7 841 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 TUT1Q9H6E5 874 aaKnown RBP9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 TMOD4Q9NZQ9 345 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 A0A0J9YVX5 310 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 GOLGA8IPA6NC78 632 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 GOLGA8JA6NMD2 632 aa9.35□□□□□ -0.91
SMARCA1-203ENST00000371123 O00370 1275 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms