RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PDZD7Q9H5P4 517 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 AGO3Q9H9G7 860 aaKnown RBP11.95□□□□□ -0.5
BRCC3-204ENST00000369462 ST3GAL5Q9UNP4 418 aa11.95□□□□□ -0.5
BRCC3-204ENST00000369462 PIN4Q9Y237 131 aaKnown RBP11.95□□□□□ -0.5
BRCC3-204ENST00000369462 ABLIM1O14639 778 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 PROZP22891 400 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 ACOT2P49753 483 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 NOLC1Q14978 699 aaKnown RBP eCLIP11.94□□□□□ -0.5
BRCC3-204ENST00000369462 SEZ6Q53EL9 994 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 FAM26DQ5JW98 314 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 CBWD2Q8IUF1 395 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 CCDC155Q8N6L0 562 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 TRIM5Q9C035 493 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 AGPAT5Q9NUQ2 364 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 ARMCX3Q9UH62 379 aaPredicted RBP11.94□□□□□ -0.5
BRCC3-204ENST00000369462 SIP14410 1827 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 SELPP16109 830 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 CD52P31358 61 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 MCL1Q07820 350 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 LPIN1Q14693 890 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 SNRNP35Q16560 246 aaKnown RBP11.94□□□□□ -0.5
BRCC3-204ENST00000369462 NOTUMQ6P988 496 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 TRAF7Q6Q0C0 670 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 GPD1LQ8N335 351 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 TUBGCP2Q9BSJ2 902 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 MKNK1Q9BUB5 465 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 CDT1Q9H211 546 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 VPS16Q9H269 839 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 TAB2Q9NYJ8 693 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 IFNKQ9P0W0 207 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 PADI3Q9ULW8 664 aa11.94□□□□□ -0.5
BRCC3-204ENST00000369462 UMODL1Q5DID0 1318 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 LRRC10BA6NIK2 292 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 PES1O00541 588 aaKnown RBP11.93□□□□□ -0.5
BRCC3-204ENST00000369462 SLC16A3O15427 465 aaKnown RBP11.93□□□□□ -0.5
BRCC3-204ENST00000369462 UBASH3AP57075 661 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 RBL2Q08999 1139 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 MBTPS1Q14703 1052 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 ZBTB41Q5SVQ8 909 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 COL13A1Q5TAT6 717 aaPredicted RBP11.93□□□□□ -0.5
BRCC3-204ENST00000369462 LRRC8DQ7L1W4 858 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 APTXQ7Z2E3 356 aaKnown RBP11.93□□□□□ -0.5
BRCC3-204ENST00000369462 THNSL1Q8IYQ7 743 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 FBXL18Q96ME1 805 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 ADPGKQ9BRR6 497 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 HIPK3Q9H422 1215 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 LIMA1Q9UHB6 759 aaKnown RBP11.93□□□□□ -0.5
BRCC3-204ENST00000369462 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 KIAA0391O15091 583 aaKnown RBP11.93□□□□□ -0.5
BRCC3-204ENST00000369462 GPR182O15218 404 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 OGTO15294 1046 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 EXTL3O43909 919 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 AXLP30530 894 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 OSTNP61366 133 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 SARM1Q6SZW1 724 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 FRMD5Q7Z6J6 570 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 CEP120Q8N960 986 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 NAP1L5Q96NT1 182 aaPredicted RBP11.93□□□□□ -0.5
BRCC3-204ENST00000369462 NOC4LQ9BVI4 516 aaKnown RBP11.93□□□□□ -0.5
BRCC3-204ENST00000369462 PPP1R12CQ9BZL4 782 aa11.93□□□□□ -0.5
BRCC3-204ENST00000369462 METTL14Q9HCE5 456 aaKnown RBP11.93□□□□□ -0.5
BRCC3-204ENST00000369462 ZNF233A6NK53 670 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 N4BP3O15049 544 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 LDHAP00338 332 aaKnown RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 ADRB2P07550 413 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 MARSP56192 900 aaKnown RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 PAK2Q13177 524 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 TCERG1LQ5VWI1 586 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 SLC27A1Q6PCB7 646 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 CRELD2Q6UXH1 353 aaPredicted RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 TRIM59Q8IWR1 403 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 BORCS6Q96GS4 357 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 KIAA1586Q9HCI6 787 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 TMEM39AQ9NV64 488 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 FAM189A1O60320 539 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 MCF2P10911 925 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 TNFSF9P41273 254 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 COPB1P53618 953 aaKnown RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 DCAF17Q5H9S7 520 aaPredicted RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 TWF2Q6IBS0 349 aaKnown RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 UBE2Q1Q7Z7E8 422 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 USP38Q8NB14 1042 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 CCDC127Q96BQ5 260 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 EIF2AQ9BY44 585 aaKnown RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 TRIM6Q9C030 488 aaPredicted RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 XPO4Q9C0E2 1151 aaKnown RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 NPTXRO95502 500 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 ADCY5O95622 1261 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 CLTBP09497 229 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 KRT13P13646 458 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 CYP2C18P33260 490 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 CCL23P55773 120 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 INTS8Q75QN2 995 aaKnown RBP11.92□□□□□ -0.5
BRCC3-204ENST00000369462 ERVK-5Q9HDB9 667 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 TBX21Q9UL17 535 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 SQORQ9Y6N5 450 aa11.92□□□□□ -0.5
BRCC3-204ENST00000369462 TPM2P07951 284 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 BFSP1Q12934 665 aa11.91□□□□□ -0.5
BRCC3-204ENST00000369462 MAN2A1Q16706 1144 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms