RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 SCN4BQ8IWT1 228 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CEP120Q8N960 986 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 SYT2Q8N9I0 419 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 APPL2Q8NEU8 664 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 C18orf8Q96DM3 657 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 REEP2Q9BRK0 252 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 TUBE1Q9UJT0 475 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 INPP5FQ9Y2H2 1132 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 NKRFO15226 690 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 HSD17B4P51659 736 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 FCGRTP55899 365 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 SATB1Q01826 763 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 TMEM132DQ14C87 1099 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 CYP4F22Q6NT55 531 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 COL23A1Q86Y22 540 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 MRIQ9BWK5 157 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 RGL1Q9NZL6 768 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PIN4Q9Y237 131 aaKnown RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 TMX2Q9Y320 296 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 TTC26A0AVF1 554 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 TARSL2A2RTX5 802 aaKnown RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 FMO5P49326 533 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 EMC2Q15006 297 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 TMED2Q15363 201 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 SNRNP35Q16560 246 aaKnown RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 NOTUMQ6P988 496 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PDXDC1Q6P996 788 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 C4orf22Q6V702 233 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 RNF180Q86T96 592 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 DNERQ8NFT8 737 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 EPAS1Q99814 870 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 EFHD1Q9BUP0 239 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PARD6BQ9BYG5 372 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 PPCSQ9HAB8 311 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 TXLNGQ9NUQ3 528 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 FGFR1OP2Q9NVK5 253 aa5.17□□□□□ -1.58
SCN3A-202ENST00000360093 ZBTB12Q9Y330 459 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-202ENST00000360093 SPDYE2BA6NHP3 402 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 SMAPO00193 183 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 SPDYE6P0CI01 402 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 TGFB3P10600 412 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 RGS2P41220 211 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 GFPT1Q06210 699 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 RAD51Q06609 339 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 PPP6R3Q5H9R7 873 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 RCOR2Q8IZ40 523 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 KIRREL3Q8IZU9 778 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 SAAL1Q96ER3 474 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 MON2Q7Z3U7 1717 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 GTF2H1P32780 548 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 ANTXR2P58335 489 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 MAPRE1Q15691 268 aaKnown RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 ZNF394Q53GI3 561 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 JADE1Q6IE81 842 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 SERPINI1Q99574 410 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 FOXP3Q9BZS1 431 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 TMEM39BQ9GZU3 492 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 SMYD2Q9NRG4 433 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 DPYSL4O14531 572 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 PLSCR1O15162 318 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 MX2P20592 715 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 PCSK1P29120 753 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 SPARCL1Q14515 664 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 EZH2Q15910 746 aaKnown RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 Q4G0T1 1027 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 ZNF484Q5JVG2 852 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 POLLQ9UGP5 575 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 INTUQ9ULD6 942 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 KPNA7A9QM74 516 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 CLTAP09496 248 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 SREBF1P36956 1147 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 OAZ1P54368 228 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 CASP8Q14790 479 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 FAM102AQ5T9C2 384 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 BTBD8Q5XKL5 378 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 FAM163AQ96GL9 167 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 TMEM106CQ9BVX2 250 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 KCNH7Q9NS40 1196 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 ZDHHC9Q9Y397 364 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 ADGRG1Q9Y653 693 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 MYOM1P52179 1685 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 A0A087WUV0 522 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 DDX5P17844 614 aaKnown RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 ROR1Q01973 937 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 PRKCEQ02156 737 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 CRLF3Q8IUI8 442 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 SPATA2LQ8IUW3 424 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 C11orf70Q9BRQ4 267 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 AP1M1Q9BXS5 423 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 FAM129AQ9BZQ8 928 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 MRPL40Q9NQ50 206 aaKnown RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 A0A087WWV3 80 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 KIF3CO14782 793 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 DCTN3O75935 186 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 BCAR1P56945 870 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 NCOA4Q13772 614 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 NR1I3Q14994 352 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 SNF8Q96H20 258 aa5.16□□□□□ -1.58
SCN3A-202ENST00000360093 RTFDC1Q9BY42 306 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-202ENST00000360093 TMEM51Q9NW97 253 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms