RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 GFPT1Q06210 699 aaPredicted RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 NAALADL2Q58DX5 795 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 LRRC6Q86X45 466 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 NME9Q86XW9 330 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ATP6V1E2Q96A05 226 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ERP44Q9BS26 406 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 GLT8D2Q9H1C3 349 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 POLD4Q9HCU8 107 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ADAMTS1Q9UHI8 967 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PHTF1Q9UMS5 762 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 H3BNX3 289 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 CCDC130P13994 396 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TATP17735 454 aaPredicted RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 VCPP55072 806 aaKnown RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 MECOMQ03112 1051 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 OASLQ15646 514 aaKnown RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 PTPROQ16827 1216 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TAF1BQ53T94 588 aaPredicted RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 RSBN1Q5VWQ0 802 aaPredicted RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 CAPN12Q6ZSI9 719 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TMPRSS6Q8IU80 811 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 SLC17A8Q8NDX2 589 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 GRPEL2Q8TAA5 225 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 SLC10A4Q96EP9 437 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PGM2Q96G03 612 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 CHP1Q99653 195 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 EXOC7Q9UPT5 735 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 SQORQ9Y6N5 450 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 IL12RB1P42701 662 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 FXR1P51114 621 aaKnown RBP eCLIP5.32□□□□□ -1.56
SKP1-202ENST00000353411 MAP3K10Q02779 954 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 MAPRE2Q15555 327 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 SETD3Q86TU7 594 aaPredicted RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 SAMD3Q8N6K7 520 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 UBXN6Q9BZV1 441 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 PFASO15067 1338 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 RP1L1Q8IWN7 2480 aaPredicted RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 LRRC53A6NM62 1247 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 CES2O00748 559 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 OPLAHO14841 1288 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ITIH2P19823 946 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 LETM2Q2VYF4 491 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ZFP1Q6P2D0 407 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 CASC4Q6P4E1 433 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 CLEC4GQ6UXB4 293 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 PACS1Q6VY07 963 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 CYFIP1Q7L576 1253 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 PRCCQ92733 491 aaPredicted RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 SPATA16Q9BXB7 569 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 TLK1Q9UKI8 766 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 V9GY48 417 aaPredicted RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 MAST3O60307 1309 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 SH3TC1Q8TE82 1336 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 PCDH11XQ9BZA7 1347 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 MYH7P12883 1935 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 IDH3BO43837 385 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ASMTLO95671 621 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 S100A9P06702 114 aaKnown RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 HSPD1P10809 573 aaKnown RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 FGFR4P22455 802 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 KCNMA1Q12791 1236 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ADAM9Q13443 819 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 SLC29A2Q14542 456 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 DCUN1D2Q6PH85 259 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 RNF207Q6ZRF8 634 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ABTB2Q8N961 1025 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ATP8B4Q8TF62 1192 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 MS4A14Q96JA4 679 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 PRDM11Q9NQV5 511 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 GDF3Q9NR23 364 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 THRAP3Q9Y2W1 955 aaKnown RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 NINQ8N4C6 2090 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 GPAA1O43292 621 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 AFPP02771 609 aaKnown RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 CDK7P50613 346 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ZNF844Q08AG5 666 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 INPP5AQ14642 412 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 MESDQ14696 234 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ZBTB41Q5SVQ8 909 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ELMSAN1Q6PJG2 1045 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 GRAMD1CQ8IYS0 662 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 CHCHD4Q8N4Q1 142 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 TIPINQ9BVW5 301 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 CLIC5Q9NZA1 410 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 VPS54Q9P1Q0 977 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 MROH7Q68CQ1 1323 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 RFX7Q2KHR2 1363 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 EFCAB6Q5THR3 1501 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 CALCRLQ16602 461 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 METTL16Q86W50 562 aaKnown RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 BTBD6Q96KE9 485 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 PLEKHF1Q96S99 279 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 DNAJC7Q99615 494 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 HAUS7Q99871 368 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 RNF26Q9BY78 433 aaPredicted RBP5.32□□□□□ -1.56
SKP1-202ENST00000353411 EHD4Q9H223 541 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 CYP4F11Q9HBI6 524 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 PREBQ9HCU5 417 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 ARHGEF38Q9NXL2 777 aa5.32□□□□□ -1.56
SKP1-202ENST00000353411 COPG2Q9UBF2 871 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms